Project measure / variable:   Shorter5   broken_tail

ID, description, units MPD:110142   broken_tail   percentage of sperm with broken tails   [%]  
Data set, strains Shorter5   CC RIX   28 strains     sex: m     age: 7-44wks
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  STRAIN COMPARISON PLOT
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Shorter5 - percentage of sperm with broken tails



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means7.9961   %
Median of the strain means8.1334   %
SD of the strain means± 2.7435
Coefficient of variation (CV)0.3431
Min–max range of strain means3.5   –   12.425   %
Mean sample size per strain3.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 23 589.1329 25.6145 1.408 0.1326
Residuals 82 1491.8014 18.1927


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 002) m 4.85 2.0506   2   1.45 0.4228 3.4, 6.3 -1.15
RIX:CC(001 x 011) m 10.8 6.6566   3 3.8432 0.6163 5.3, 18.2 1.02
RIX:CC(001 x 018) m 6.7 3.453   7 1.3051 0.5154 3.6, 13.0 -0.47
RIX:CC(002 x 010) m 7.9667 2.9956   3 1.7295 0.376 5.5, 11.3 -0.01
RIX:CC(002 x 011) m 5.9143 3.6581   7 1.3826 0.6185 3.1, 13.9 -0.76
RIX:CC(003 x 018) m 6.3 3.2114   4 1.6057 0.5098 3.2, 10.7 -0.62
RIX:CC(008 x 013) m 5.6875 2.5255   8 0.89292 0.4441 1.6, 9.6 -0.84
RIX:CC(008 x 021) m 5.1286 1.5446   7 0.58379 0.3012 3.5, 7.6 -1.05
RIX:CC(008 x 065) m 12.367 9.098   3 5.2527 0.7357 4.9, 22.5 1.59
RIX:CC(010 x 001) m 3.5 0.0   1   0.0 0.0 3.5, 3.5 -1.64
RIX:CC(010 x 002) m 10.3 0.0   1   0.0 0.0 10.3, 10.3 0.84
RIX:CC(010 x 011) m 7.7 3.4525   7 1.3049 0.4484 3.8, 13.8 -0.11
RIX:CC(011 x 003) m 10.24 4.291   5 1.919 0.419 4.8, 14.7 0.82
RIX:CC(011 x 018) m 4.3 0.0   1   0.0 0.0 4.3, 4.3 -1.35
RIX:CC(013 x 053) m 4.9 0.0   1   0.0 0.0 4.9, 4.9 -1.13
RIX:CC(018 x 002) m 8.45 3.1838   4 1.5919 0.3768 5.7, 12.8 0.17
RIX:CC(018 x 003) m 8.8 2.3302   3 1.3454 0.2648 6.2, 10.7 0.29
RIX:CC(018 x 010) m 10.517 5.8742   6 2.3981 0.5586 3.5, 20.5 0.92
RIX:CC(021 x 065) m 10.475 5.9016   4 2.9508 0.5634 5.7, 18.5 0.9
RIX:CC(034 x 008) m 4.4 3.677   2   2.6 0.8357 1.8, 7.0 -1.31
RIX:CC(034 x 021) m 4.975 1.7783   4 0.88917 0.3575 3.4, 7.5 -1.1
RIX:CC(034 x 053) m 6.56 4.0402   5 1.8068 0.6159 1.3, 11.0 -0.52
RIX:CC(053 x 021) m 8.3 2.7613   5 1.2349 0.3327 5.2, 11.1 0.11
RIX:CC(053 x 034) m 9.3333 5.1588   3 2.9784 0.5527 3.6, 13.6 0.49
RIX:CC(065 x 008) m 12.425 5.7268   4 2.8634 0.4609 4.5, 18.1 1.61
RIX:CC(065 x 013) m 11.2 5.5287   4 2.7644 0.4936 5.4, 18.5 1.17
RIX:CC(065 x 034) m 9.5 2.3777   4 1.1888 0.2503 6.7, 12.3 0.55
RIX:CC(065 x 053) m 12.3 11.455   2   8.1 0.9313 4.2, 20.4 1.57


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 002) m 4.85 3.0160156244 10.8498158503 -1.1498158503
RIX:CC(001 x 011) m 10.8 2.4625664454 15.698829128 5.901170872
RIX:CC(001 x 018) m 6.7 1.6121281628 9.9070364708 3.4929635292
RIX:CC(002 x 010) m 7.9666666667 2.4625664454 12.8654957946 3.0678375387
RIX:CC(002 x 011) m 5.9142857143 1.6121281628 9.1213221851 2.7072492435
RIX:CC(003 x 018) m 6.3 2.1326451002 10.5425104736 2.0574895264
RIX:CC(008 x 013) m 5.6875 1.5080078122 8.6874079251 2.6875920749
RIX:CC(008 x 021) m 5.1285714286 1.6121281628 8.3356078994 1.9215349578
RIX:CC(008 x 065) m 12.3666666667 2.4625664454 17.2654957946 7.4678375387
RIX:CC(010 x 011) m 7.7 1.6121281628 10.9070364708 4.4929635292
RIX:CC(011 x 003) m 10.24 1.9074957664 14.0346167257 6.4453832743
RIX:CC(018 x 002) m 8.45 2.1326451002 12.6925104736 4.2074895264
RIX:CC(018 x 003) m 8.8 2.4625664454 13.698829128 3.901170872
RIX:CC(018 x 010) m 10.5166666667 1.7412974326 13.9806619629 7.0526713704
RIX:CC(021 x 065) m 10.475 2.1326451002 14.7175104736 6.2324895264
RIX:CC(034 x 008) m 4.4 3.0160156244 10.3998158503 -1.5998158503
RIX:CC(034 x 021) m 4.975 2.1326451002 9.2175104736 0.7324895264
RIX:CC(034 x 053) m 6.56 1.9074957664 10.3546167257 2.7653832743
RIX:CC(053 x 021) m 8.3 1.9074957664 12.0946167257 4.5053832743
RIX:CC(053 x 034) m 9.3333333333 2.4625664454 14.2321624613 4.4345042054
RIX:CC(065 x 008) m 12.425 2.1326451002 16.6675104736 8.1824895264
RIX:CC(065 x 013) m 11.2 2.1326451002 15.4425104736 6.9574895264
RIX:CC(065 x 034) m 9.5 2.1326451002 13.7425104736 5.2574895264
RIX:CC(065 x 053) m 12.3 3.0160156244 18.2998158503 6.3001841497




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA