Project measure / variable:   Odet1   sperm_per_mouse

ID, description, units MPD:53731   sperm_per_mouse   sperm count per mouse (x 106)   [n]  
Data set, strains Odet1   inbred w/CC8   8 strains     sex: m     age: 10-66wks
Procedure sperm count
Ontology mappings

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  STRAIN COMPARISON PLOT
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Odet1 - sperm count per mouse (x 106)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means16.8   n
Median of the strain means16.2   n
SD of the strain means± 7.12
Coefficient of variation (CV)0.423
Min–max range of strain means7.02   –   28.5   n
Mean sample size per strain21.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 7504.1884 1072.0269 14.1566 < 0.0001
Residuals 163 12343.4176 75.7265


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 16.8 8.96   26 1.76 0.532 5.45, 37.8 0.0
A/J m 8.16 5.49   22 1.17 0.674 1.5, 27.0 -1.22
C57BL/6J m 28.5 9.01   32 1.59 0.316 9.6, 50.5 1.64
CAST/EiJ m 7.02 2.48   9 0.828 0.354 2.25, 10.5 -1.38
NOD/ShiLtJ m 22.5 11.3   19 2.6 0.503 4.86, 45.6 0.8
NZO/HlLtJ m 20.3 9.2   23 1.92 0.454 9.0, 43.6 0.49
PWK/PhJ m 15.7 5.08   14 1.36 0.324 5.5, 23.0 -0.16
WSB/EiJ m 15.6 10.3   26 2.01 0.659 3.5, 42.5 -0.17


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 16.8358 1.7066 20.2057 13.4658
A/J m 8.1555 1.8553 11.819 4.4919
C57BL/6J m 28.4953 1.5383 31.5329 25.4577
CAST/EiJ m 7.0233 2.9007 12.7511 1.2955
NOD/ShiLtJ m 22.5021 1.9964 26.4442 18.56
NZO/HlLtJ m 20.2848 1.8145 23.8678 16.7018
PWK/PhJ m 15.685 2.3257 20.2775 11.0925
WSB/EiJ m 15.5692 1.7066 18.9392 12.1993




  GWAS USING LINEAR MIXED MODELS