Project measure / variable:   Shorter4   sperm_count

ID, description, units MPD:110104   sperm_count   sperm count per mouse (x 106)   [n]  
Data set, strains Shorter4   CC   12 strains     sex: m     age: 15-33wks
Procedure sperm count
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  STRAIN COMPARISON PLOT
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Shorter4 - sperm count per mouse (x 106)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested12 strains
Mean of the strain means24.109   n
Median of the strain means23.263   n
SD of the strain means± 7.2743
Coefficient of variation (CV)0.3017
Min–max range of strain means15.05   –   35.4   n
Mean sample size per strain3.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 11 2078.2906 188.9355 1.2142 0.3231
Residuals 28 4357.0571 155.6092


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC001/Unc m 15.05 9.808   4 4.904 0.6517 6.4, 28.4 -1.25
CC002/Unc m 18.525 12.966   4 6.483 0.6999 2.2, 31.4 -0.77
CC003/Unc m 29.733 10.546   3 6.0886 0.3547 17.8, 37.8 0.77
CC008/GeniUnc m 29.6 7.9196   2   5.6 0.2676 24.0, 35.2 0.75
CC010/GeniUnc m 16.65 12.68   4 6.3401 0.7616 0.9, 27.8 -1.03
CC011/Unc m 18.067 12.626   3 7.2898 0.6989 7.9, 32.2 -0.83
CC013/GeniUnc m 16.55 20.718   2   14.65 1.2519 1.9, 31.2 -1.04
CC018/Unc m 29.267 11.2   3 6.4664 0.3827 18.1, 40.5 0.71
CC021/Unc m 33.943 14.131   7 5.3409 0.4163 12.1, 53.1 1.35
CC034/Unc m 24.925 12.137   4 6.0687 0.487 10.5, 40.2 0.11
CC053/Unc m 21.6 12.162   2   8.6 0.5631 13.0, 30.2 -0.34
CC065/Unc m 35.4 3.1113   2   2.2 0.0879 33.2, 37.6 1.55


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC001/Unc m 15.05 6.2371705058 27.8262646087 2.2737353913
CC002/Unc m 18.525 6.2371705058 31.3012646087 5.7487353913
CC003/Unc m 29.7333333333 7.202064141 44.4860929554 14.9805737112
CC008/GeniUnc m 29.6 8.8206911201 47.668366686 11.531633314
CC010/GeniUnc m 16.65 6.2371705058 29.4262646087 3.8737353913
CC011/Unc m 18.0666666667 7.202064141 32.8194262888 3.3139070446
CC013/GeniUnc m 16.55 8.8206911201 34.618366686 -1.518366686
CC018/Unc m 29.2666666667 7.202064141 44.0194262888 14.5139070446
CC021/Unc m 33.9428571429 4.7148577266 43.6008053825 24.2849089032
CC034/Unc m 24.925 6.2371705058 37.7012646087 12.1487353913
CC053/Unc m 21.6 8.8206911201 39.668366686 3.531633314
CC065/Unc m 35.4 8.8206911201 53.468366686 17.331633314




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA