Project measure / variable:   Shorter5   abnormal_tail

ID, description, units MPD:110141   abnormal_tail   percentage of sperm with abnormal tail bending   [%]  
Data set, strains Shorter5   CC RIX   28 strains     sex: m     age: 7-44wks
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  STRAIN COMPARISON PLOT
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Shorter5 - percentage of sperm with abnormal tail bending



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means14.253   %
Median of the strain means13.508   %
SD of the strain means± 4.3508
Coefficient of variation (CV)0.3052
Min–max range of strain means7.175   –   26.6   %
Mean sample size per strain3.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 23 1131.2753 49.1859 3.3486 < 0.0001
Residuals 82 1204.4391 14.6883


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 002) m 13.85 8.1317   2   5.75 0.5871 8.1, 19.6 -0.09
RIX:CC(001 x 011) m 12.667 1.0263   3 0.59255 0.081 11.8, 13.8 -0.36
RIX:CC(001 x 018) m 13.357 2.878   7 1.0878 0.2155 9.9, 17.6 -0.21
RIX:CC(002 x 010) m 17.1 3.6592   3 2.1127 0.214 12.9, 19.6 0.65
RIX:CC(002 x 011) m 16.071 4.1716   7 1.5767 0.2596 9.5, 23.4 0.42
RIX:CC(003 x 018) m 16.025 2.125   4 1.0625 0.1326 12.9, 17.5 0.41
RIX:CC(008 x 013) m 8.6375 3.6335   8 1.2847 0.4207 4.5, 15.7 -1.29
RIX:CC(008 x 021) m 16.671 6.8716   7 2.5972 0.4122 9.1, 30.3 0.56
RIX:CC(008 x 065) m 13.7 2.7622   3 1.5948 0.2016 10.6, 15.9 -0.13
RIX:CC(010 x 001) m 26.6 0.0   1   0.0 0.0 26.6, 26.6 2.84
RIX:CC(010 x 002) m 20.3 0.0   1   0.0 0.0 20.3, 20.3 1.39
RIX:CC(010 x 011) m 13.5 4.6933   7 1.7739 0.3476 8.5, 19.8 -0.17
RIX:CC(011 x 003) m 21.78 4.1246   5 1.8446 0.1894 16.2, 26.8 1.73
RIX:CC(011 x 018) m 20.7 0.0   1   0.0 0.0 20.7, 20.7 1.48
RIX:CC(013 x 053) m 9.0 0.0   1   0.0 0.0 9.0, 9.0 -1.21
RIX:CC(018 x 002) m 7.175 1.3525   4 0.67623 0.1885 6.1, 9.0 -1.63
RIX:CC(018 x 003) m 17.3 3.0265   3 1.7474 0.1749 13.9, 19.7 0.7
RIX:CC(018 x 010) m 13.517 1.6534   6 0.67499 0.1223 11.6, 16.0 -0.17
RIX:CC(021 x 065) m 9.25 3.2378   4 1.6189 0.35 4.7, 12.3 -1.15
RIX:CC(034 x 008) m 12.4 1.9799   2   1.4 0.1597 11.0, 13.8 -0.43
RIX:CC(034 x 021) m 12.925 2.4144   4 1.2072 0.1868 9.6, 14.9 -0.31
RIX:CC(034 x 053) m 13.32 4.9084   5 2.1951 0.3685 5.2, 17.4 -0.21
RIX:CC(053 x 021) m 15.06 1.9386   5 0.86695 0.1287 12.2, 16.9 0.19
RIX:CC(053 x 034) m 14.267 6.5363   3 3.7737 0.4582 7.1, 19.9 0.0
RIX:CC(065 x 008) m 10.675 1.9839   4 0.99195 0.1858 8.9, 13.2 -0.82
RIX:CC(065 x 013) m 9.475 0.83016   4 0.41508 0.0876 8.8, 10.6 -1.1
RIX:CC(065 x 034) m 11.025 3.803   4 1.9015 0.3449 6.7, 15.0 -0.74
RIX:CC(065 x 053) m 12.75 2.4749   2   1.75 0.1941 11.0, 14.5 -0.35


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 002) m 13.85 2.7100075724 19.2410683537 8.4589316463
RIX:CC(001 x 011) m 12.6666666667 2.2127119171 17.068455545 8.2648777883
RIX:CC(001 x 018) m 13.3571428571 1.4485599788 16.238790104 10.4754956102
RIX:CC(002 x 010) m 17.1 2.2127119171 21.5017888784 12.6982111216
RIX:CC(002 x 011) m 16.0714285714 1.4485599788 18.9530758183 13.1897813245
RIX:CC(003 x 018) m 16.025 1.9162647315 19.8370609908 12.2129390092
RIX:CC(008 x 013) m 8.6375 1.3550037862 11.3330341769 5.9419658231
RIX:CC(008 x 021) m 16.6714285714 1.4485599788 19.5530758183 13.7897813245
RIX:CC(008 x 065) m 13.7 2.2127119171 18.1017888784 9.2982111216
RIX:CC(010 x 011) m 13.5 1.4485599788 16.3816472469 10.6183527531
RIX:CC(011 x 003) m 21.78 1.713959281 25.1896110039 18.3703889961
RIX:CC(018 x 002) m 7.175 1.9162647315 10.9870609908 3.3629390092
RIX:CC(018 x 003) m 17.3 2.2127119171 21.7017888784 12.8982111216
RIX:CC(018 x 010) m 13.5166666667 1.5646236014 16.6292014319 10.4041319014
RIX:CC(021 x 065) m 9.25 1.9162647315 13.0620609908 5.4379390092
RIX:CC(034 x 008) m 12.4 2.7100075724 17.7910683537 7.0089316463
RIX:CC(034 x 021) m 12.925 1.9162647315 16.7370609908 9.1129390092
RIX:CC(034 x 053) m 13.32 1.713959281 16.7296110039 9.9103889961
RIX:CC(053 x 021) m 15.06 1.713959281 18.4696110039 11.6503889961
RIX:CC(053 x 034) m 14.2666666667 2.2127119171 18.668455545 9.8648777883
RIX:CC(065 x 008) m 10.675 1.9162647315 14.4870609908 6.8629390092
RIX:CC(065 x 013) m 9.475 1.9162647315 13.2870609908 5.6629390092
RIX:CC(065 x 034) m 11.025 1.9162647315 14.8370609908 7.2129390092
RIX:CC(065 x 053) m 12.75 2.7100075724 18.1410683537 7.3589316463




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA