MPD: Phenotype measures mapped to VT:0002160, reproductive system morphology trait

Phenotype measures in Odet1 associated with ontology term
VT:0002160 'reproductive system morphology trait'

All measures in this list are mapped to the ontology descendants of VT:0002160. None are mapped to VT:0002160 directly.

VT:0002216 seminiferous tubule morphology trait
VT:0002673 sperm quantity
VT:0002997 seminal gland size trait
VT:0010019 epididymis mass
VT:0010042 sperm morphology trait
VT:1000644 testis mass

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)	Year
Odet1:11	Odet1	organ weights	(none)	mean epididymis plus vas deferens weight [g] epidid_vasdef_wt 53711	inbred w/CC8	8	m	10-66wks	N=21	2015

Odet1:12	Odet1	organ weights	(none)	seminal vesicles weight [g] seminal_ves_wt 53712	inbred w/CC8	8	m	10-66wks	N=27	2015

Odet1:13	Odet1	organ weights	(none)	mean testis weight [g] testis_wt 53713	inbred w/CC8	8	m	10-66wks	N=27	2015

Odet1:21	Odet1	histopathology	(none)	mean seminiferous tubule radius, transverse section [µm] seminif_radius 53721	inbred w/CC8	8	m	10-66wks	N=26	2015

Odet1:22	Odet1	histopathology	(none)	seminiferious epithelium length, transverse section [cm] seminif_length 53722	inbred w/CC8	8	m	10-66wks	N=26	2015

Odet1:23	Odet1	histopathology	(none)	number of seminiferous tubules, transverse section [n] seminif_count 53723	inbred w/CC8	8	m	10-66wks	N=26	2015

Odet1:24	Odet1	histopathology	(none)	number of seminiferous tubules with vacuoles, transverse section [n] seminif_vacuoles 53724	inbred w/CC8	8	m	10-66wks	N=26	2015

Odet1:25	Odet1	histopathology	(none)	number of seminiferous tubules with many vacuoles, transverse section [n] seminif_many_vacuoles 53725	inbred w/CC8	8	m	10-66wks	N=26	2015

Odet1:26	Odet1	histopathology	(none)	number of seminiferous tubules with germ cell loss, transverse section [n] seminif_germ_loss 53726	inbred w/CC8	8	m	10-66wks	N=18	2015

Odet1:27	Odet1	histopathology	(none)	number of seminiferous tubules with abnormal germ cells, transverse section [n] seminif_germ_abnormal 53727	inbred w/CC8	8	m	10-66wks	N=26	2015

Odet1:28	Odet1	histopathology	(none)	number of seminiferous tubules with germ cell sloughing, transverse section [n] seminif_germ_slough 53728	inbred w/CC8	8	m	10-66wks	N=26	2015

Odet1:31	Odet1	sperm count	(none)	sperm count per mouse (x 10⁶) [n] sperm_per_mouse 53731	inbred w/CC8	8	m	10-66wks	N=21	2015

Odet1:32	Odet1	sperm count	(none)	sperm count per mg testis weight (x 10³) [n] sperm_per_testis 53732	inbred w/CC8	8	m	10-66wks	N=20	2015

Odet1:33	Odet1	sperm count	(none)	sperm count per seminiferous epithelium length (x 10³) [n] sperm_per_seminif 53733	inbred w/CC8	8	m	10-66wks	N=19	2015

Odet1:41	Odet1	histopathology	(none)	percentage of sperm with normal morphology [%] sperm_normal 53741	inbred w/CC8	8	m	10-66wks	N=14	2015

Odet1:42	Odet1	histopathology	(none)	percentage of sperm with abnormal head shape [%] sperm_abnormal_head 53742	inbred w/CC8	8	m	10-66wks	N=14	2015

Odet1:43	Odet1	histopathology	(none)	percentage of sperm with abnormal tail bending [%] sperm_abnormal_tail 53743	inbred w/CC8	8	m	10-66wks	N=14	2015

Odet1:44	Odet1	histopathology	(none)	percentage of sperm with broken tails [%] sperm_broken_tail 53744	inbred w/CC8	8	m	10-66wks	N=14	2015

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