MPD: Phenotype measures mapped to MP:0005389, reproductive system phenotype

Phenotype measures in Odet1 associated with ontology term
MP:0005389 'reproductive system phenotype'

All measures in this list are mapped to the ontology descendants of MP:0005389. None are mapped to MP:0005389 directly.

MP:0002216 abnormal seminiferous tubule morphology
MP:0002673 abnormal sperm number
MP:0004543 abnormal sperm physiology
MP:0004850 abnormal testis weight
MP:0004908 abnormal seminal vesicle weight
MP:0004926 abnormal epididymis size
MP:0006362 abnormal male germ cell morphology
MP:0008892 abnormal sperm flagellum morphology
MP:0009230 abnormal sperm head morphology

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)	Year
Odet1:11	Odet1	organ weights	(none)	mean epididymis plus vas deferens weight [g] epidid_vasdef_wt 53711	inbred w/CC8	8	m	10-66wks	N=21	2015

Odet1:12	Odet1	organ weights	(none)	seminal vesicles weight [g] seminal_ves_wt 53712	inbred w/CC8	8	m	10-66wks	N=27	2015

Odet1:13	Odet1	organ weights	(none)	mean testis weight [g] testis_wt 53713	inbred w/CC8	8	m	10-66wks	N=27	2015

Odet1:21	Odet1	histopathology	(none)	mean seminiferous tubule radius, transverse section [µm] seminif_radius 53721	inbred w/CC8	8	m	10-66wks	N=26	2015

Odet1:22	Odet1	histopathology	(none)	seminiferious epithelium length, transverse section [cm] seminif_length 53722	inbred w/CC8	8	m	10-66wks	N=26	2015

Odet1:23	Odet1	histopathology	(none)	number of seminiferous tubules, transverse section [n] seminif_count 53723	inbred w/CC8	8	m	10-66wks	N=26	2015

Odet1:24	Odet1	histopathology	(none)	number of seminiferous tubules with vacuoles, transverse section [n] seminif_vacuoles 53724	inbred w/CC8	8	m	10-66wks	N=26	2015

Odet1:25	Odet1	histopathology	(none)	number of seminiferous tubules with many vacuoles, transverse section [n] seminif_many_vacuoles 53725	inbred w/CC8	8	m	10-66wks	N=26	2015

Odet1:26	Odet1	histopathology	(none)	number of seminiferous tubules with germ cell loss, transverse section [n] seminif_germ_loss 53726	inbred w/CC8	8	m	10-66wks	N=18	2015

Odet1:27	Odet1	histopathology	(none)	number of seminiferous tubules with abnormal germ cells, transverse section [n] seminif_germ_abnormal 53727	inbred w/CC8	8	m	10-66wks	N=26	2015

Odet1:28	Odet1	histopathology	(none)	number of seminiferous tubules with germ cell sloughing, transverse section [n] seminif_germ_slough 53728	inbred w/CC8	8	m	10-66wks	N=26	2015

Odet1:31	Odet1	sperm count	(none)	sperm count per mouse (x 10⁶) [n] sperm_per_mouse 53731	inbred w/CC8	8	m	10-66wks	N=21	2015

Odet1:32	Odet1	sperm count	(none)	sperm count per mg testis weight (x 10³) [n] sperm_per_testis 53732	inbred w/CC8	8	m	10-66wks	N=20	2015

Odet1:33	Odet1	sperm count	(none)	sperm count per seminiferous epithelium length (x 10³) [n] sperm_per_seminif 53733	inbred w/CC8	8	m	10-66wks	N=19	2015

Odet1:41	Odet1	histopathology	(none)	percentage of sperm with normal morphology [%] sperm_normal 53741	inbred w/CC8	8	m	10-66wks	N=14	2015

Odet1:42	Odet1	histopathology	(none)	percentage of sperm with abnormal head shape [%] sperm_abnormal_head 53742	inbred w/CC8	8	m	10-66wks	N=14	2015

Odet1:43	Odet1	histopathology	(none)	percentage of sperm with abnormal tail bending [%] sperm_abnormal_tail 53743	inbred w/CC8	8	m	10-66wks	N=14	2015

Odet1:44	Odet1	histopathology	(none)	percentage of sperm with broken tails [%] sperm_broken_tail 53744	inbred w/CC8	8	m	10-66wks	N=14	2015

Odet1:51	Odet1	metabolic panel	(none)	lactate production per 10⁸ sperm [µmole] sperm_lactate 53751	inbred w/CC8	8	m	10-66wks	N=8	2015

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