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Examples
Phenotype measures associated with
ontology
term
MA:0000411 'testis'
List studies
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This list includes measures mapped MA:0000411 AND its
ontology descendants
. Alternatively, you can show measures mapped to
MA:0000411 only
.
MA:0000412 seminiferous tubule
Filter Table Results
Data set
Clear All
Ankra-Badu1
(1)
Dzur-Gejdosova1
(2)
Handel1
(2)
Lazear1
(1)
Odet1
(9)
Payseur2
(16)
Shorter4
(3)
Shorter5
(3)
Shorter8
(3)
Procedure / Protocol
Clear All
histopathology
(20)
microscopy
(1)
organ dimensions
(2)
organ weights
(17)
Treatment
Clear All
(none)
(40)
Panel
Clear All
CC
(4)
CC RIX
(3)
DO population
(3)
inbred
(2)
inbred w/CC8
(9)
QTL population
(19)
Sex
Clear All
both
(1)
m
(39)
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Data set
Procedure / Protocol
Treatment
Phenotype Measure / Variable (click to view)
Panel
No. of Strains
Sex
Age
Sample Size (Avg)
Year
Ankra-Badu1:12
Ankra-Badu1
organ weights
(none)
right testis weight [mg]
TESTIS
21212
QTL population
both
10wks
N=502
2009
Dzur-Gejdosova1:2
Dzur-Gejdosova1
organ weights
(none)
testes weight [mg]
TW
27202
QTL population
m
9wks
N=254
2012
Dzur-Gejdosova1:3
Dzur-Gejdosova1
microscopy
(none)
sperm cells counted in Bürker chamber [millions]
SC
27203
QTL population
m
9wks
N=254
2012
Handel1:41
Handel1
organ weights
(none)
seminal vesicle weight, left and right combined [g]
seminal_vesicle
12041
inbred
14
m
8-10wks
N=5
2010
Handel1:45
Handel1
organ weights
(none)
testicular weight, left and right combined [g]
testes
12045
inbred
14
m
8-10wks
N=5
2010
Lazear1:1
Lazear1
organ weights
(none)
testis weight (1 testis) [g]
testis_wt
63101
CC
12
m
15-22wks
N=2
2018
Odet1:13
Odet1
organ weights
(none)
mean testis weight [g]
testis_wt
53713
inbred w/CC8
8
m
10-66wks
N=27
2015
Odet1:21
Odet1
histopathology
(none)
mean seminiferous tubule radius, transverse section [µm]
seminif_radius
53721
inbred w/CC8
8
m
10-66wks
N=26
2015
Odet1:22
Odet1
histopathology
(none)
seminiferious epithelium length, transverse section [cm]
seminif_length
53722
inbred w/CC8
8
m
10-66wks
N=26
2015
Odet1:23
Odet1
histopathology
(none)
number of seminiferous tubules, transverse section [n]
seminif_count
53723
inbred w/CC8
8
m
10-66wks
N=26
2015
Odet1:24
Odet1
histopathology
(none)
number of seminiferous tubules with vacuoles, transverse section [n]
seminif_vacuoles
53724
inbred w/CC8
8
m
10-66wks
N=26
2015
Odet1:25
Odet1
histopathology
(none)
number of seminiferous tubules with many vacuoles, transverse section [n]
seminif_many_vacuoles
53725
inbred w/CC8
8
m
10-66wks
N=26
2015
Odet1:26
Odet1
histopathology
(none)
number of seminiferous tubules with germ cell loss, transverse section [n]
seminif_germ_loss
53726
inbred w/CC8
8
m
10-66wks
N=18
2015
Odet1:27
Odet1
histopathology
(none)
number of seminiferous tubules with abnormal germ cells, transverse section [n]
seminif_germ_abnormal
53727
inbred w/CC8
8
m
10-66wks
N=26
2015
Odet1:28
Odet1
histopathology
(none)
number of seminiferous tubules with germ cell sloughing, transverse section [n]
seminif_germ_slough
53728
inbred w/CC8
8
m
10-66wks
N=26
2015
Payseur2:1
Payseur2
organ weights
(none)
right testis weight adjusted for body weight [mg/g]
RelRTestiswt
64001
QTL population
m
10-11wks
N=312
2018
Payseur2:2
Payseur2
organ weights
(none)
right testis weight [mg]
RTestisWt
64002
QTL population
m
10-11wks
N=312
2018
Payseur2:4
Payseur2
organ dimensions
(none)
testis width [mm]
TestisWidth
64004
QTL population
m
10-11wks
N=312
2018
Payseur2:5
Payseur2
organ dimensions
(none)
testis height [mm]
TestisHeight
64005
QTL population
m
10-11wks
N=312
2018
Payseur2:6
Payseur2
histopathology
(none)
mulinucleated syncytia [n]
MNSyncytiaPerTestis
64006
QTL population
m
10-11wks
N=312
2018
Payseur2:7
Payseur2
histopathology
(none)
tubules with apoptosis [n]
TubuleswApop
64007
QTL population
m
10-11wks
N=312
2018
Payseur2:8
Payseur2
histopathology
(none)
spermatogonia with apoptosis [n]
ApopGonia
64008
QTL population
m
10-11wks
N=312
2018
Payseur2:9
Payseur2
histopathology
(none)
meiotic cells with apoptosis [n]
ApopMeiotic
64009
QTL population
m
10-11wks
N=312
2018
Payseur2:10
Payseur2
histopathology
(none)
round spermatids with apoptosis [n]
ApopRS
64010
QTL population
m
10-11wks
N=312
2018
Payseur2:11
Payseur2
histopathology
(none)
Stage VII Sertoli cells [n]
VIIsertolis
64011
QTL population
m
10-11wks
N=312
2018
Payseur2:12
Payseur2
histopathology
(none)
Stage VII pachytene cells [n]
VIIpachys
64012
QTL population
m
10-11wks
N=312
2018
Payseur2:13
Payseur2
histopathology
(none)
Stage VII round spermatids [n]
VIIRSs
64013
QTL population
m
10-11wks
N=312
2018
Payseur2:14
Payseur2
histopathology
(none)
Stage VII pachytene cells per Sertoli cell [n]
PachyperSertoli
64014
QTL population
m
10-11wks
N=312
2018
Payseur2:15
Payseur2
histopathology
(none)
Stage VII round spermatids per Sertoli cell [n]
RSperSertoli
64015
QTL population
m
10-11wks
N=312
2018
Payseur2:16
Payseur2
histopathology
(none)
Stage VII round spermatids per pachytene cell [n]
RSperPachy
64016
QTL population
m
10-11wks
N=312
2018
Payseur2:17
Payseur2
histopathology
(none)
Stage VII mean tubule area [µm
2
]
VIITubuleArea
64017
QTL population
m
10-11wks
N=312
2018
Shorter4:2
Shorter4
organ weights
(none)
testis weight [g]
testis
110094
left right
CC
12
m
15-33wks
N=3
2019
Shorter4:4
Shorter4
organ weights
(none)
testis weight mean [g]
testis_mean
110096
CC
12
m
15-33wks
N=3
2019
Shorter4:5
Shorter4
organ weights
(none)
testis weight as a percentage of body weight [%]
testis_pct_bw
110097
CC
12
m
15-33wks
N=3
2019
Shorter5:2
Shorter5
organ weights
(none)
testis weight [g]
testis
110143
left right
CC RIX
28
m
7-44wks
N=4
2019
Shorter5:4
Shorter5
organ weights
(none)
testis weight mean [g]
testis_mean
110121
CC RIX
28
m
7-44wks
N=4
2019
Shorter5:5
Shorter5
organ weights
(none)
testis weight as percentage of body weight [%]
testis_pct_bw
110122
CC RIX
28
m
7-44wks
N=4
2019
Shorter8:3
Shorter8
organ weights
(none)
testis weight [g]
testis
110158
left right
DO population
m
12-15wks
N=150
2019
Shorter8:5
Shorter8
organ weights
(none)
testis weight mean [g]
testis_mean
110160
DO population
m
12-15wks
N=150
2019
Shorter8:6
Shorter8
organ weights
(none)
testis weight as percentage of body weight [%]
testis_pct_bw
110161
DO population
m
12-15wks
N=150
2019
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