Project measure / variable:   Jaxpheno7   cross_extensor

ID, description, units MPD:34938   cross_extensor   extension of opposite foot after toe pinch on horizontal wire-grid (score 0-1)   [score]  
Data set, strains Jaxpheno7   inbred   6 strains     sex: m     age: 10wks
Procedure observation (SHIRPA)
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  STRAIN COMPARISON PLOT
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Jaxpheno7 - extension of opposite foot after toe pinch on horizontal wire-grid (score 0-1)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested6 strains
Mean of the strain means0.803   score
Median of the strain means0.909   score
SD of the strain means± 0.267
Coefficient of variation (CV)0.332
Min–max range of strain means0.333   –   1.00   score
Mean sample size per strain8.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 5 2.4421 0.4884 5.1077 0.0009
Residuals 45 4.303 0.0956


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J m 0.667 0.516   6 0.211 0.775 -0.51
AKR/J m 1.0 0.0   11 0.0 0.0 1.0, 1.0 0.74
BALB/cJ m 0.818 0.405   11 0.122 0.494 0.06
C3H/HeJ m 0.333 0.516   6 0.211 1.55 -1.76
C57BL/6J m 1.0 0.0   6 0.0 0.0 1.0, 1.0 0.74
DBA/2J m 1.0 0.0   11 0.0 0.0 1.0, 1.0 0.74


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 0.6667 0.1262 0.9209 0.4124
AKR/J m 1.0 0.0932 1.1878 0.8122
BALB/cJ m 0.8182 0.0932 1.006 0.6304
C3H/HeJ m 0.3333 0.1262 0.5876 0.0791
C57BL/6J m 1.0 0.1262 1.2543 0.7457
DBA/2J m 1.0 0.0932 1.1878 0.8122




  GWAS USING LINEAR MIXED MODELS