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Project measure / variable:   Jaxpheno7   limb_tone

ID, description, units MPD:34931   limb_tone   resistance to gentle finger-tip pressure of the hind paws during supine restraint (score 0-4)   [score]  
Data set, strains Jaxpheno7   inbred   6 strains     sex: m     age: 10wks
Procedure observation (SHIRPA)
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  STRAIN COMPARISON PLOT
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Jaxpheno7 - resistance to gentle finger-tip pressure of the hind paws during supine restraint (score 0-4)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested6 strains
Mean of the strain means1.62   score
Median of the strain means1.65   score
SD of the strain means± 0.378
Coefficient of variation (CV)0.234
Min–max range of strain means1.00   –   2.17   score
Mean sample size per strain8.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 5 6.1159 1.2232 5.2957 0.0007
Residuals 45 10.3939 0.231


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J m 1.5 0.548   6 0.224 0.365 1.0, 2.0 -0.31
AKR/J m 1.0 0.0   11 0.0 0.0 1.0, 1.0 -1.63
BALB/cJ m 1.64 0.674   11 0.203 0.412 1.0, 3.0 0.06
C3H/HeJ m 1.67 0.516   6 0.211 0.31 1.0, 2.0 0.14
C57BL/6J m 2.17 0.408   6 0.167 0.188 2.0, 3.0 1.46
DBA/2J m 1.73 0.467   11 0.141 0.27 1.0, 2.0 0.3


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 1.5 0.1962 1.8952 1.1048
AKR/J m 1.0 0.1449 1.2919 0.7081
BALB/cJ m 1.6364 0.1449 1.9282 1.3445
C3H/HeJ m 1.6667 0.1962 2.0618 1.2715
C57BL/6J m 2.1667 0.1962 2.5618 1.7715
DBA/2J m 1.7273 0.1449 2.0191 1.4354




  GWAS USING LINEAR MIXED MODELS