Project measure / variable:   Jaxpheno7   abdominal_tone

ID, description, units MPD:34932   abdominal_tone   abdominal tone via palpation during supine restraint (score 0-2)   [score]  
Data set, strains Jaxpheno7   inbred   6 strains     sex: m     age: 10wks
Procedure observation (SHIRPA)
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  STRAIN COMPARISON PLOT
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Jaxpheno7 - abdominal tone via palpation during supine restraint (score 0-2)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested6 strains
Mean of the strain means1.00   score
Median of the strain means1.00   score
SD of the strain means± 0
Coefficient of variation (CV)0
Min–max range of strain means1.00   –   1.00   score
Mean sample size per strain8.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 5 0.0 0.0 1.5882 0.1828
Residuals 45 0.0 0.0


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
A/J m 1.0 0.0   6 0.0 0.0 1.0, 1.0 0.0
AKR/J m 1.0 0.0   11 0.0 0.0 1.0, 1.0 0.0
BALB/cJ m 1.0 0.0   11 0.0 0.0 1.0, 1.0 0.0
C3H/HeJ m 1.0 0.0   6 0.0 0.0 1.0, 1.0 0.0
C57BL/6J m 1.0 0.0   6 0.0 0.0 1.0, 1.0 0.0
DBA/2J m 1.0 0.0   11 0.0 0.0 1.0, 1.0 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 1.0 0.0 1.0 1.0
AKR/J m 1.0 0.0 1.0 1.0
BALB/cJ m 1.0 0.0 1.0 1.0
C3H/HeJ m 1.0 0.0 1.0 1.0
C57BL/6J m 1.0 0.0 1.0 1.0
DBA/2J m 1.0 0.0 1.0 1.0




  GWAS USING LINEAR MIXED MODELS