Project measure / variable:   Jaxpheno7   catalepsy

ID, description, units MPD:34941   catalepsy   characteristic movement with head facing upward on vertical wire grid (score 0-4)   [score]  
Data set, strains Jaxpheno7   inbred   6 strains     sex: m     age: 10wks
Procedure observation (SHIRPA)
Ontology mappings

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  STRAIN COMPARISON PLOT


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested6 strains
Mean of the strain means0.298   score
Median of the strain means0.137   score
SD of the strain means± 0.457
Coefficient of variation (CV)1.54
Min–max range of strain means0   –   1.18   score
Mean sample size per strain8.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 5 10.4955 2.0991 2.8493 0.0256
Residuals 45 33.1515 0.7367


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
A/J m 0.333 0.516   6 0.211 1.55 0.08
AKR/J m 0.273 0.905   11 0.273 3.32 -0.05
BALB/cJ m 0.0 0.0   11 0.0 0.0 -0.65
C3H/HeJ m 0.0 0.0   6 0.0 0.0 -0.65
C57BL/6J m 0.0 0.0   6 0.0 0.0 -0.65
DBA/2J m 1.18 1.54   11 0.464 1.3 1.93


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
A/J m 0.3333 0.3504 1.0391 -0.3724
AKR/J m 0.2727 0.2588 0.794 -0.2485
BALB/cJ m 0.0 0.2588 0.5212 -0.5212
C3H/HeJ m 0.0 0.3504 0.7058 -0.7058
C57BL/6J m 0.0 0.3504 0.7058 -0.7058
DBA/2J m 1.1818 0.2588 1.703 0.6606




  GWAS USING LINEAR MIXED MODELS

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