MPD: Data set: Golani1

Lipkind D, Sakov A, Kafkafi N, Elmer GI, Benjamini Y, Golani I. New replicable anxiety-related measures of wall vs center behavior of mice in the open field. J Appl Physiol. 2004 Jul;97(1):347-59. Epub 2004 Feb 27. PubMed 14990560

Notes
In the project data set, the test site can be determined by examining the animal "id".

Golani1 downloads
• Download Golani1 project data set animal data, as uploaded
• Download Golani1 animal data matrix with factor-related expansion applied as necessary
• Download Golani1 strain means, SD, N, etc. one row per strain/sex/measure

Ontology terms mapped to Golani1 measures:

MP:0001362 abnormal anxiety-related response
MP:0001392 abnormal locomotor behavior
MP:0002063 abnormal learning/memory/conditioning
MP:0013189 abnormal exploration in a new environment
VT:0001392 locomotor behavior trait
VT:0002063 learning/memory/conditioning trait
VT:0010471 exploratory behavior trait
VT:0010716 anxiety-related behavior trait

Investigators	Ilan Golani Tel Aviv University, Tel Aviv ISRAEL Gregory I Elmer University of Maryland, Baltimore, MD Neri Kafkafi University of Maryland, Baltimore, MD Yoav Benjamini Tel Aviv University, Tel Aviv ISRAEL
Participants	Lipkind D, Sakov A, Fonio A, Horev G, Dvorkin A, Mayo CL
Contact	Ilan Golani ilan99@post.tau.ac.il Lab web site
Acknowledgements	Funding provided by NIH NS40234 Generous funds from AstraZeneca were used to defray the cost of mice through the Mouse Phenome Project Collaborations Program.
Project type	Phenotype strain survey data set
MPD identifiers	Golani1 MPD:109
Data changelog	2 updates/corrections. Initial release date: 03/2004.
Formatted citation	Click above to copy-paste the entire citation for this MPD web page.

An investigation into exploratory and locomotor behavior utilizing video tracking apparatus and specialized analysis software. Degree of replication across 3 different laboratories was a secondary outcome.

Procedures conducted:

• open field test

Locomotor activity, exploratory and anxiety-related behavior.

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)
Golani1:1	Golani1	open field test	(none)	total locomotor activity during 30 min test [cm] DST 10901	inbred	8	m	10wks	N=34

Golani1:2	Golani1	open field test	(none)	latency until first reach a speed of at least half-maximum velocity, 30 min test, cube root [cuberoot(s)] LMXHS 10902	inbred	8	m	10wks	N=34

Golani1:3	Golani1	open field test	(none)	proportional change in activity in the 1st-half and 2nd-half sessions, 30 min test [ratio] DSTRD 10903	inbred	8	m	10wks	N=34

Golani1:4	Golani1	open field test	(none)	number of progresion segments, 30 min test [n] NP 10904	inbred	8	m	10wks	N=35

Golani1:5	Golani1	open field test	(none)	median length of progression segments, 30 min test, square root [sqrt(cm)] LNGP 10905	inbred	8	m	10wks	N=34

Golani1:6	Golani1	open field test	(none)	median of maximal speed in progression segments, 30 min test [cm/s] PMXS 10906	inbred	8	m	10wks	N=34

Golani1:7	Golani1	open field test	(none)	median of the acceleration to maximum speed in progression segments, 30 min test, log transformed [log(cm/s²)] MSDR 10907	inbred	8	m	10wks	N=34

Golani1:8	Golani1	open field test	(none)	median of radius of turn in progression segments, 30 min test, normalized to radius, square root [sqrt(cm)] TRAD 10908	inbred	8	m	10wks	N=34

Golani1:9	Golani1	open field test	(none)	median of absolute turn rates in progression segments, 30 min test, normalized to 360° [deg/s] TRT 10909	inbred	8	m	10wks	N=34

Golani1:10	Golani1	open field test	(none)	mean of lingering speed, 30 min test [s] LMS 10910	inbred	8	m	10wks	N=34

Golani1:11	Golani1	open field test	(none)	proportion of time spent in lingering segments, 30 min test [ratio] TL 10911	inbred	8	m	10wks	N=34

Golani1:12	Golani1	open field test	(none)	median spatial spread of lingering episodes, 30 min test, log transformed [log(cm)] SPTL 10912	inbred	8	m	10wks	N=34

Golani1:13	Golani1	open field test	(none)	diversity of lingering episodes, 30 min test, logit transformed [logit(cm)] DVRS 10913	inbred	8	m	10wks	N=34

Golani1:14	Golani1	open field test	(none)	proportion of time spent away from wall, 30 min test, logit transformed [logit(ratio)] CNTRT 10914	inbred	8	m	10wks	N=34

Golani1:15	Golani1	open field test	(none)	home base relative occupancy, 30 min test, sector in degrees, log transformed [log(deg)] HBO 10915	inbred	8	m	10wks	N=34

Golani1:16	Golani1	open field test	(none)	number of excursions, 30 min test, square root [sqrt(n)] NEXC 10916	inbred	8	m	10wks	N=34

Golani1:17	Golani1	open field test	(none)	number of stops per excursions (lingering segments), 30 min test [n] NLEXC 10917	inbred	8	m	10wks	N=32

Golani1:20	Golani1	open field test	(none)	median curvature along wall, 30 min test, 1/square root [1/sqrt(deg/cm)] MCW 10920	inbred	5	m	10wks	N=46

Golani1:21	Golani1	open field test	(none)	median curvature of center segments, 30 min test, 1/square root [1/sqrt(deg/cm)] MCC 10921	inbred	5	m	10wks	N=46

Golani1:22	Golani1	open field test	(none)	median lingering duration near wall (1/(X+1)), 30 min test MLDW 10922	inbred	5	m	10wks	N=46

Golani1:23	Golani1	open field test	(none)	median lingering duration in center (1/(X+1)), 30 min test MLDC 10923	inbred	5	m	10wks	N=43

Golani1:24	Golani1	open field test	(none)	number of incursions, 30 min test [n] NI 10924	inbred	5	m	10wks	N=46

Golani1:25	Golani1	open field test	(none)	median incursion length, 30 min test, square root [sqrt(cm)] MIL 10925	inbred	5	m	10wks	N=45

Golani1:26	Golani1	open field test	(none)	median incursion maximal wall distance, 30 min test [cm] MIMWD 10926	inbred	5	m	10wks	N=45

Golani1:27	Golani1	open field test	(none)	proportion of incursions beginning with stop, 30 min test, logit transformed [logit(ratio)] PIBS 10927	inbred	5	m	10wks	N=45

Golani1:28	Golani1	open field test	(none)	average segment length in incursions, 30 min test [cm] ASLI 10928	inbred	5	m	10wks	N=45

Golani1:29	Golani1	open field test	(none)	outbound/inbound speed ratio in incursions, 30 min test [ratio] OISRI 10929	inbred	5	m	10wks	N=45

Golani1:30	Golani1	open field test	(none)	median curvature in near-wall incursions, 30 min test, 1/square root [1/sqrt(deg)] MCNW 10930	inbred	5	m	10wks	N=46

Golani1:31	Golani1	open field test	(none)	median curvature in intermediate incursions, 30 min test, 1/square root [1/sqrt(deg)] MCI 10931	inbred	5	m	10wks	N=46

Golani1:32	Golani1	open field test	(none)	median curvature in arena-crossing incursions, 30 min test, 1/square root [1/sqrt(deg)] MCAC 10932	inbred	5	m	10wks	N=42

Golani1:33	Golani1	open field test	(none)	number of near-wall incursions 30 min test, square root [sqrt(n)] NNW 10933	inbred	5	m	10wks	N=46

Golani1:34	Golani1	open field test	(none)	number of intermediate incursions, 30 min test [n] NII 10934	inbred	5	m	10wks	N=46

Golani1:35	Golani1	open field test	(none)	number of arena-crossing incursions, 30 min test, square root [sqrt(n)] NAC 10935	inbred	5	m	10wks	N=46

Golani1: Anxiety-related behavior in 8 inbred strains of mice surveyed in three laboratories (2003)