Phenotype measure:   Golani1   NNW

ID, description, units MPD:10933   NNW   number of near-wall incursions 30 min test, square root   [sqrt(n)]
Data set, strains Golani1   inbred   5 strains     sex: m     age: 10wks
Procedure open field test
Ontology mappings


  STRAIN COMPARISON PLOT
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Golani1 - number of near-wall incursions 30 min test, square root



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means60.6   sqrt(n)
Median of the strain means61.0   sqrt(n)
SD of the strain means± 18.9
Coefficient of variation (CV)0.313
Min–max range of strain means39.5   –   85.3   sqrt(n)
Mean sample size per strain46.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 4 61629.2057 15407.3014 16.1402 < 0.0001
Residuals 225 214782.9856 954.591


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
C3H/HeJ m 72.3 40.2   35 6.8 0.557 13.0, 192.0 0.62
C57BL/6J m 61.0 32.9   63 4.15 0.54 16.0, 192.0 0.02
DBA/2J m 39.5 24.4   63 3.07 0.618 0.0, 111.0 -1.11
FVB/NJ m 85.3 34.8   36 5.8 0.408 28.0, 166.0 1.3
SJL/J m 45.0 20.4   33 3.55 0.453 15.0, 101.0 -0.82


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
C3H/HeJ m 72.2857 5.2225 82.5769 61.9945
C57BL/6J m 60.9683 3.8926 68.6388 53.2977
DBA/2J m 39.4762 3.8926 47.1468 31.8056
FVB/NJ m 85.2778 5.1494 95.425 75.1305
SJL/J m 45.0303 5.3784 55.6287 34.4319




  GENOME-WIDE ASSOCIATION (GWAS) VIEW
Plot generated with pyLMM using 132K SNP array. Click on plot to view at larger size.