Project measure / variable:   Golani1   NAC

ID, description, units MPD:10935   NAC   number of arena-crossing incursions, 30 min test, square root   [sqrt(n)]  
Data set, strains Golani1   inbred   5 strains     sex: m     age: 10wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Golani1 - number of arena-crossing incursions, 30 min test, square root

FVB/NJC57BL/6JSJL/JC3H/HeJDBA/2J sqrt(n) 0102030405060femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means14.1   sqrt(n)
Median of the strain means11.8   sqrt(n)
SD of the strain means± 8.71
Coefficient of variation (CV)0.619
Min–max range of strain means3.67   –   26.6   sqrt(n)
Mean sample size per strain46.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 4 14206.904 3551.726 51.9075 < 0.0001
Residuals 225 15395.4265 68.4241


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
C3H/HeJ m 10.1 7.44   35 1.26 0.738 -0.46
C57BL/6J m 18.2 8.32   63 1.05 0.457 5.0, 48.0 0.47
DBA/2J m 3.67 3.74   63 0.471 1.02 -1.2
FVB/NJ m 26.6 14.0   36 2.33 0.524 4.0, 64.0 1.44
SJL/J m 11.8 6.93   33 1.21 0.589 -0.26


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
C3H/HeJ m 10.0857 1.3982 12.841 7.3305
C57BL/6J m 18.2063 1.0422 20.26 16.1527
DBA/2J m 3.6667 1.0422 5.7203 1.613
FVB/NJ m 26.6389 1.3786 29.3556 23.9222
SJL/J m 11.7576 1.44 14.5951 8.9201




  GWAS USING LINEAR MIXED MODELS

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