Project measure / variable:   Golani1   TRAD

ID, description, units MPD:10908   TRAD   median of radius of turn in progression segments, 30 min test, normalized to radius, square root   [sqrt(cm)]  
Data set, strains Golani1   inbred   8 strains     sex: m     age: 10wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Golani1 - median of radius of turn in progression segments, 30 min test, normalized to radius, square root

DBA/2J129S1/SvImJC57BL/6JFVB/NJSJL/JBALB/cByJC3H/HeJA/J sqrt(cm) 0.30.40.50.60.70.80.91.01.11.21.31.4femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means0.977   sqrt(cm)
Median of the strain means0.943   sqrt(cm)
SD of the strain means± 0.154
Coefficient of variation (CV)0.157
Min–max range of strain means0.761   –   1.23   sqrt(cm)
Mean sample size per strain34.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 5.7328 0.819 48.0821 < 0.0001
Residuals 268 4.5648 0.017


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ m 1.17 0.0769   34 0.0132 0.0656 0.97, 1.32 1.25
A/J m 0.761 0.225   32 0.0398 0.296 0.34, 1.21 -1.41
BALB/cByJ m 0.933 0.206   33 0.0358 0.221 0.49, 1.29 -0.29
C3H/HeJ m 0.862 0.107   35 0.0181 0.124 0.74, 1.23 -0.75
C57BL/6J m 0.976 0.0675   36 0.0113 0.0692 0.83, 1.15 -0.01
DBA/2J m 1.23 0.0852   36 0.0142 0.0692 0.97, 1.37 1.64
FVB/NJ m 0.951 0.081   36 0.0135 0.0852 0.76, 1.1 -0.17
SJL/J m 0.934 0.111   34 0.0191 0.119 0.67, 1.19 -0.28


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 1.1724 0.0224 1.2164 1.1283
A/J m 0.7606 0.0231 0.806 0.7152
BALB/cByJ m 0.933 0.0227 0.9778 0.8883
C3H/HeJ m 0.8617 0.0221 0.9051 0.8183
C57BL/6J m 0.9756 0.0218 1.0184 0.9327
DBA/2J m 1.2311 0.0218 1.2739 1.1883
FVB/NJ m 0.9511 0.0218 0.9939 0.9083
SJL/J m 0.9341 0.0224 0.9782 0.8901




  GWAS USING LINEAR MIXED MODELS

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