Phenotype measure:   Golani1   NEXC


  STRAIN COMPARISON PLOT
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Golani1 - number of excursions, 30 min test, square root



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means4.02   sqrt(n)
Median of the strain means4.02   sqrt(n)
SD of the strain means± 1.09
Coefficient of variation (CV)0.271
Min–max range of strain means2.55   –   5.68   sqrt(n)
Mean sample size per strain34.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 286.1595 40.8799 57.1192 < 0.0001
Residuals 268 191.8064 0.7157


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 4.34 0.885   34 0.152 0.204 2.45, 5.83 0.29
A/J m 2.55 1.15   32 0.203 0.45 -1.35
BALB/cByJ m 2.73 1.06   33 0.185 0.39 -1.18
C3H/HeJ m 3.97 0.682   35 0.115 0.172 2.24, 5.66 -0.05
C57BL/6J m 5.24 0.625   36 0.104 0.119 3.87, 6.08 1.11
DBA/2J m 4.07 0.944   36 0.157 0.232 1.0, 6.16 0.04
FVB/NJ m 5.68 0.613   36 0.102 0.108 4.36, 7.0 1.52
SJL/J m 3.61 0.674   34 0.116 0.187 2.24, 4.8 -0.38


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 4.3385 0.1451 4.6242 4.0529
A/J m 2.5503 0.1496 2.8448 2.2559
BALB/cByJ m 2.73 0.1473 3.0199 2.4401
C3H/HeJ m 3.968 0.143 4.2495 3.6865
C57BL/6J m 5.2392 0.141 5.5168 4.9616
DBA/2J m 4.0708 0.141 4.3484 3.7932
FVB/NJ m 5.6842 0.141 5.9618 5.4066
SJL/J m 3.6097 0.1451 3.8954 3.3241




  GWAS USING LINEAR MIXED MODELS