Phenotype measure:   Golani1   MCAC

ID, description, units MPD:10932   MCAC   median curvature in arena-crossing incursions, 30 min test, 1/square root   [1/sqrt(deg)]
Data set, strains Golani1   inbred   5 strains     sex: m     age: 10wks
Procedure open field test
Ontology mappings


  STRAIN COMPARISON PLOT
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Golani1 - median curvature in arena-crossing incursions, 30 min test, 1/square root



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested5 strains
Mean of the strain means9.71   1/sqrt(deg)
Median of the strain means8.90   1/sqrt(deg)
SD of the strain means± 3.03
Coefficient of variation (CV)0.312
Min–max range of strain means6.70   –   13.9   1/sqrt(deg)
Mean sample size per strain42.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 4 1353.4342 338.3586 29.6508 < 0.0001
Residuals 206 2350.7562 11.4114


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
C3H/HeJ m 11.7 4.38   32 0.774 0.373 6.64, 22.7 0.66
C57BL/6J m 7.37 1.83   63 0.23 0.248 3.95, 13.5 -0.77
DBA/2J m 8.9 4.66   48 0.672 0.523 2.14, 30.1 -0.27
FVB/NJ m 6.7 2.15   36 0.358 0.32 2.78, 13.0 -0.99
SJL/J m 13.9 3.45   32 0.611 0.248 7.34, 23.7 1.38


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
C3H/HeJ m 11.7197 0.5972 12.897 10.5423
C57BL/6J m 7.3692 0.4256 8.2083 6.5301
DBA/2J m 8.8965 0.4876 9.8578 7.9352
FVB/NJ m 6.7003 0.563 7.8103 5.5903
SJL/J m 13.9116 0.5972 15.0889 12.7342




  GENOME-WIDE ASSOCIATION (GWAS) VIEW
Plot generated with pyLMM using 132K SNP array. Click on plot to view at larger size.