MPD: Phenotype measures mapped to VT:0005389, reproductive system trait

Phenotype measures in Jax5 associated with ontology term
VT:0005389 'reproductive system trait'

All measures in this list are mapped to the ontology descendants of VT:0005389. None are mapped to VT:0005389 directly.

VT:0001923 female fertility trait
VT:0002161 female fecundity trait
VT:0002210 sex determination trait
VT:1000189 offspring quantity

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)	Year
Jax5:1	Jax5	colony observation	(none)	total number of litters per dam [n] total_litters 31401	inbred	35	f	6-40wks	N=46	2009

Jax5:2	Jax5	colony observation	(none)	latency to first litter per dam, dam age at first litter minus age at mating [wks] latency_first_litter 31402	inbred	35	f	6-40wks	N=46	2009

Jax5:3	Jax5	colony observation	(none)	mean interval between consecutive litters per dam [d] mean_interval 31403	inbred	35	f	6-40wks	N=44	2009

Jax5:4	Jax5	colony observation	(none)	number of pups born per litter [n] born 31404	inbred	35	f	6-40wks	N=184	2009

Jax5:5	Jax5	colony observation	(none)	number of pups weaned per litter [n] wean 31405	inbred	35	f	6-40wks	N=184	2009

Jax5:6	Jax5	colony observation	(none)	wean to born ratio per litter [ratio] wean_born_ratio 31406	inbred	35	f	6-40wks	N=184	2009

Jax5:7	Jax5	colony observation	(none)	total number of pups born per dam [n] born_total 31407	inbred	35	f	6-40wks	N=46	2009

Jax5:8	Jax5	colony observation	(none)	mean number of pups born based on mean number of litters per dam [n] born_mean 31408	inbred	35	f	6-40wks	N=46	2009

Jax5:9	Jax5	colony observation	(none)	total number of pups weaned per dam [n] wean_total 31409	inbred	35	f	6-40wks	N=46	2009

Jax5:10	Jax5	colony observation	(none)	mean number of pups weaned based on mean number of litters per dam [n] wean_mean 31410	inbred	35	f	6-40wks	N=46	2009

Jax5:11	Jax5	colony observation	(none)	wean to born ratio per dam, adjusted for biological parameters [ratio] parenting_index 31411	inbred	35	f	6-40wks	N=38	2009

Jax5:12	Jax5	colony observation	(none)	total pups weaned per dam over mean interval between litters, adjusted for biological parameters [n/d] fecundity_index 31412	inbred	35	f	6-40wks	N=44	2009

Jax5:13	Jax5	colony observation	(none)	percent females weaned per dam [%] pct_female_dam 31413	inbred	35	f	6-40wks	N=46	2009

Jax5:14	Jax5	colony observation	(none)	female to male ratio per dam, adjusted for biological parameters [ratio] sex_ratio 31414	inbred	35	f	6-40wks	N=38	2009

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