Project measure / variable:   Jax5   parenting_index

ID, description, units MPD:31411   parenting_index   wean to born ratio per dam, adjusted for biological parameters   [ratio]  
Data set, strains Jax5   inbred   35 strains     sex: f     age: 6-40wks
Procedure colony observation
Ontology mappings

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  STRAIN COMPARISON PLOT
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Jax5 - wean to born ratio per dam, adjusted for biological parameters



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested35 strains
Mean of the strain means0.923   ratio
Median of the strain means0.944   ratio
SD of the strain means± 0.0638
Coefficient of variation (CV)0.0691
Min–max range of strain means0.660   –   0.987   ratio
Mean sample size per strain38.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 34 4.2607 0.1253 10.5531 < 0.0001
Residuals 1310 15.5558 0.0119


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J f 0.923 0.125   30 0.0228 0.135 0.6, 1.0 0.0
129S1/SvImJ f 0.919 0.114   43 0.0174 0.124 0.6, 1.0 -0.06
129X1/SvJ f 0.905 0.135   44 0.0203 0.149 0.5, 1.0 -0.28
A/J f 0.926 0.118   43 0.0179 0.127 0.5, 1.0 0.05
AKR/J f 0.974 0.0498   39 0.00798 0.0511 0.8, 1.0 0.8
B6.129P2-Apoetm1Unc/J f 0.863 0.127   46 0.0187 0.147 0.5, 1.0 -0.94
B6(Cg)-Tyrc-2J/J f 0.969 0.063   13 0.0175 0.065 0.8, 1.0 0.72
BALB/cByJ f 0.959 0.131   34 0.0224 0.136 0.3, 1.0 0.57
BALB/cJ f 0.987 0.0341   46 0.00502 0.0345 0.9, 1.0 1.0
C3HeB/FeJ f 0.966 0.129   32 0.0227 0.133 0.3, 1.0 0.68
C3H/HeJ f 0.952 0.0707   42 0.0109 0.0742 0.8, 1.0 0.46
C3H/HeOuJ f 0.944 0.0934   43 0.0142 0.0989 0.6, 1.0 0.33
C57BL/10J f 0.926 0.0978   43 0.0149 0.106 0.7, 1.0 0.05
C57BL/6J f 0.948 0.0707   50 0.01 0.0746 0.8, 1.0 0.39
C57BLKS/J f 0.895 0.105   20 0.0235 0.117 0.6, 1.0 -0.44
C57L/J f 0.965 0.0629   26 0.0123 0.0651 0.8, 1.0 0.66
CAST/EiJ f 0.861 0.108   38 0.0175 0.125 0.6, 1.0 -0.97
CBA/CaJ f 0.971 0.0549   45 0.00818 0.0565 0.8, 1.0 0.75
CBA/J f 0.927 0.0861   49 0.0123 0.0929 0.7, 1.0 0.06
DBA/1J f 0.945 0.0843   49 0.012 0.0892 0.7, 1.0 0.35
DBA/1LacJ f 0.896 0.104   49 0.0149 0.116 0.5, 1.0 -0.42
DBA/2J f 0.967 0.0774   49 0.0111 0.08 0.6, 1.0 0.69
FVB/NJ f 0.986 0.0452   50 0.0064 0.0459 0.8, 1.0 0.99
KK/HlJ f 0.875 0.157   16 0.0393 0.179 0.4, 1.0 -0.75
LP/J f 0.844 0.155   39 0.0249 0.184 0.2, 1.0 -1.24
MRL/MpJ f 0.96 0.0665   42 0.0103 0.0693 0.7, 1.0 0.58
NOD.CB17-Prkdcscid/J f 0.96 0.0851   47 0.0124 0.0887 0.6, 1.0 0.58
NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ f 0.97 0.0571   20 0.0128 0.0589 0.8, 1.0 0.74
NOD/ShiLtJ f 0.923 0.111   43 0.0169 0.12 0.6, 1.0 0.0
NZB/BlNJ f 0.66 0.206   25 0.0412 0.312 -4.12
NZW/LacJ f 0.842 0.144   45 0.0214 0.171 0.5, 1.0 -1.27
PL/J f 0.943 0.0987   37 0.0162 0.105 0.6, 1.0 0.31
SJL/J f 0.949 0.12   47 0.0174 0.126 0.4, 1.0 0.41
SM/J f 0.819 0.288   26 0.0566 0.352 -1.63
SWR/J f 0.983 0.0568   35 0.0096 0.0578 0.7, 1.0 0.94


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J f 0.9233 0.0199 0.9624 0.8843
129S1/SvImJ f 0.9186 0.0166 0.9512 0.886
129X1/SvJ f 0.9045 0.0164 0.9368 0.8723
A/J f 0.9256 0.0166 0.9582 0.893
AKR/J f 0.9744 0.0174 1.0086 0.9401
B6.129P2-Apoetm1Unc/J f 0.863 0.0161 0.8946 0.8315
B6(Cg)-Tyrc-2J/J f 0.9692 0.0302 1.0285 0.9099
BALB/cByJ f 0.9588 0.0187 0.9955 0.9222
BALB/cJ f 0.987 0.0161 1.0185 0.9554
C3HeB/FeJ f 0.9656 0.0193 1.0034 0.9278
C3H/HeJ f 0.9524 0.0168 0.9854 0.9194
C3H/HeOuJ f 0.9442 0.0166 0.9768 0.9116
C57BL/10J f 0.9256 0.0166 0.9582 0.893
C57BL/6J f 0.948 0.0154 0.9782 0.9178
C57BLKS/J f 0.895 0.0244 0.9428 0.8472
C57L/J f 0.9654 0.0214 1.0073 0.9235
CAST/EiJ f 0.8605 0.0177 0.8952 0.8258
CBA/CaJ f 0.9711 0.0162 1.003 0.9392
CBA/J f 0.9265 0.0156 0.9571 0.896
DBA/1J f 0.9449 0.0156 0.9754 0.9144
DBA/1LacJ f 0.8959 0.0156 0.9265 0.8654
DBA/2J f 0.9673 0.0156 0.9979 0.9368
FVB/NJ f 0.986 0.0154 1.0162 0.9558
KK/HlJ f 0.875 0.0272 0.9284 0.8216
LP/J f 0.8436 0.0174 0.8778 0.8094
MRL/MpJ f 0.9595 0.0168 0.9925 0.9265
NOD.CB17-Prkdcscid/J f 0.9596 0.0159 0.9908 0.9284
NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ f 0.97 0.0244 1.0178 0.9222
NOD/ShiLtJ f 0.9233 0.0166 0.9559 0.8907
NZB/BlNJ f 0.66 0.0218 0.7028 0.6172
NZW/LacJ f 0.8422 0.0162 0.8741 0.8104
PL/J f 0.9432 0.0179 0.9784 0.9081
SJL/J f 0.9489 0.0159 0.9801 0.9178
SM/J f 0.8192 0.0214 0.8612 0.7773
SWR/J f 0.9829 0.0184 1.019 0.9467




  GWAS USING LINEAR MIXED MODELS