Project measure / variable:   Jax5   born_mean

ID, description, units MPD:31408   born_mean   mean number of pups born based on mean number of litters per dam   [n]  
Data set, strains Jax5   inbred   35 strains     sex: f     age: 6-40wks
Procedure colony observation
Ontology mappings

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  STRAIN COMPARISON PLOT
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Jax5 - mean number of pups born based on mean number of litters per dam



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested35 strains
Mean of the strain means5.47   n
Median of the strain means5.37   n
SD of the strain means± 0.941
Coefficient of variation (CV)0.172
Min–max range of strain means4.00   –   8.43   n
Mean sample size per strain46.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 34 1408.8326 41.4363 29.5484 < 0.0001
Residuals 1583 2219.869 1.4023


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J f 4.63 1.12   49 0.16 0.242 2.3, 7.0 -0.9
129S1/SvImJ f 5.26 0.909   47 0.133 0.173 3.3, 7.7 -0.23
129X1/SvJ f 5.09 0.86   48 0.124 0.169 3.5, 7.6 -0.41
A/J f 5.37 1.42   51 0.199 0.264 2.0, 9.5 -0.11
AKR/J f 5.53 0.92   49 0.131 0.166 3.7, 7.7 0.06
B6.129P2-Apoetm1Unc/J f 5.41 1.25   50 0.177 0.232 3.0, 7.8 -0.07
B6(Cg)-Tyrc-2J/J f 6.72 1.55   18 0.365 0.23 3.0, 9.0 1.33
BALB/cByJ f 5.37 1.36   43 0.207 0.253 2.5, 8.0 -0.11
BALB/cJ f 5.62 1.37   50 0.194 0.245 2.0, 9.5 0.16
C3HeB/FeJ f 6.64 1.09   34 0.187 0.164 3.3, 8.8 1.24
C3H/HeJ f 5.17 1.19   50 0.168 0.229 1.7, 7.3 -0.32
C3H/HeOuJ f 4.99 1.07   50 0.152 0.215 3.0, 8.0 -0.51
C57BL/10J f 5.09 1.21   50 0.17 0.237 2.0, 7.3 -0.41
C57BL/6J f 5.97 0.871   51 0.122 0.146 4.5, 7.8 0.53
C57BLKS/J f 5.51 1.26   45 0.188 0.229 2.5, 8.0 0.04
C57L/J f 5.04 1.13   42 0.174 0.224 2.3, 7.0 -0.46
CAST/EiJ f 4.46 0.937   49 0.134 0.21 2.5, 7.0 -1.08
CBA/CaJ f 5.73 0.772   49 0.11 0.135 4.5, 8.3 0.27
CBA/J f 4.4 0.885   49 0.126 0.201 2.4, 7.0 -1.14
DBA/1J f 4.29 0.863   50 0.122 0.201 2.6, 7.0 -1.26
DBA/1LacJ f 4.99 0.789   49 0.113 0.158 3.0, 6.7 -0.51
DBA/2J f 4.88 0.975   49 0.139 0.2 3.2, 7.5 -0.63
FVB/NJ f 7.43 1.37   50 0.193 0.184 3.6, 9.7 2.08
KK/HlJ f 5.5 1.64   25 0.329 0.299 1.0, 8.0 0.03
LP/J f 4.0 1.03   50 0.145 0.257 2.0, 7.0 -1.57
MRL/MpJ f 5.71 1.36   50 0.193 0.239 3.0, 9.0 0.25
NOD.CB17-Prkdcscid/J f 6.16 1.6   50 0.226 0.259 3.0, 8.7 0.73
NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ f 6.13 1.99   22 0.424 0.324 2.1, 9.7 0.7
NOD/ShiLtJ f 8.43 1.69   50 0.239 0.201 4.3, 12.7 3.14
NZB/BlNJ f 4.39 1.45   50 0.205 0.33 1.0, 8.0 -1.15
NZW/LacJ f 4.82 0.924   50 0.131 0.192 3.0, 7.0 -0.69
PL/J f 4.58 0.901   49 0.129 0.197 2.0, 6.4 -0.95
SJL/J f 6.63 1.12   50 0.158 0.169 3.0, 9.0 1.23
SM/J f 4.96 1.2   50 0.169 0.241 1.5, 7.0 -0.55
SWR/J f 6.65 1.26   50 0.179 0.19 2.0, 8.5 1.25


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J f 4.6347 0.1692 4.9665 4.3029
129S1/SvImJ f 5.2596 0.1727 5.5984 4.9208
129X1/SvJ f 5.0937 0.1709 5.429 4.7585
A/J f 5.3706 0.1658 5.6958 5.0453
AKR/J f 5.5347 0.1692 5.8665 5.2029
B6.129P2-Apoetm1Unc/J f 5.414 0.1675 5.7425 5.0855
B6(Cg)-Tyrc-2J/J f 6.7167 0.2791 7.2641 6.1692
BALB/cByJ f 5.3721 0.1806 5.7263 5.0179
BALB/cJ f 5.62 0.1675 5.9485 5.2915
C3HeB/FeJ f 6.6441 0.2031 7.0425 6.2458
C3H/HeJ f 5.174 0.1675 5.5025 4.8455
C3H/HeOuJ f 4.994 0.1675 5.3225 4.6655
C57BL/10J f 5.094 0.1675 5.4225 4.7655
C57BL/6J f 5.9725 0.1658 6.2978 5.6473
C57BLKS/J f 5.5133 0.1765 5.8596 5.1671
C57L/J f 5.0381 0.1827 5.3965 4.6797
CAST/EiJ f 4.4592 0.1692 4.791 4.1274
CBA/CaJ f 5.7306 0.1692 6.0624 5.3988
CBA/J f 4.4 0.1692 4.7318 4.0682
DBA/1J f 4.288 0.1675 4.6165 3.9595
DBA/1LacJ f 4.9857 0.1692 5.3175 4.6539
DBA/2J f 4.8837 0.1692 5.2155 4.5519
FVB/NJ f 7.428 0.1675 7.7565 7.0995
KK/HlJ f 5.5 0.2368 5.9646 5.0354
LP/J f 4.0 0.1675 4.3285 3.6715
MRL/MpJ f 5.71 0.1675 6.0385 5.3815
NOD.CB17-Prkdcscid/J f 6.158 0.1675 6.4865 5.8295
NOD.Cg-Prkdcscid Il2rgtm1Wjl/SzJ f 6.1318 0.2525 6.627 5.6366
NOD/ShiLtJ f 8.426 0.1675 8.7545 8.0975
NZB/BlNJ f 4.39 0.1675 4.7185 4.0615
NZW/LacJ f 4.824 0.1675 5.1525 4.4955
PL/J f 4.5837 0.1692 4.9155 4.2519
SJL/J f 6.626 0.1675 6.9545 6.2975
SM/J f 4.958 0.1675 5.2865 4.6295
SWR/J f 6.646 0.1675 6.9745 6.3175




  GWAS USING LINEAR MIXED MODELS