Phenotype measures set:   Neuner1   cfm_6mo

ID, description, units MPD:65974   cfm_6mo   percentage of time spent freezing at 6 mo of age, day 2 contextual fear memory, 10 min test   [%]
Measures • 1st 2 min    • 2nd 2 min    • 3rd 2 min    • 4th 2 min    • 5th 2 min    • total
Data set, strains Neuner1   F1 AD-BXD   50 strains     sex: both     age: 23-25wks
Procedure fear conditioning test
Comparisontimecourse, same cohort
Ontology mappings

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Neuner1 - percentage of time spent freezing at 6 mo of age, day 2 contextual fear memory, 10 min test





  ANOVA, Q-Q NORMALITY ASSESSMENT

ANOVA Summary          "within" = Within error     "between" = Between Error (Animal ID)

Factor DF Sum of squares Mean sum of squares F value p-value (Pr>F)
within   group 4 7979.7421 1994.9355 14.6387 < 0.0001
within   group:sex 4 832.1774 208.0444 1.5266 0.1937
within   group:strain 52 6675.1003 128.3673 0.9419 0.5911
within   group:sex:strain 52 10408.7226 200.1677 1.4688 0.0239
within   Residuals 380 51785.8278 136.2785
between   sex 1 1729.3045 1729.3045 0.9862 0.3232
between   strain 13 82010.0952 6308.4689 3.5975 0.0001
between   sex:strain 13 12662.4158 974.032 0.5555 0.8829
between   Residuals 95 166591.1215 1753.5908

Q-Q normality assessment based on residuals

  


  INDIVIDUAL MEASURES
ProjectIDDrug or
challenge
Description and varname PanelStrains
tested
SexAge
Neuner1 65974 fear conditioning test (none) percentage of time spent freezing at 6 mo of age, day 2 contextual fear memory, 10 min test   [%]   1st 2 min   cfm_6mo_bin1 F1 AD-BXD 50 both 23-25wks
Neuner1 65975 fear conditioning test (none) percentage of time spent freezing at 6 mo of age, day 2 contextual fear memory, 10 min test   [%]   2nd 2 min   cfm_6mo_bin2 F1 AD-BXD 50 both 23-25wks
Neuner1 65976 fear conditioning test (none) percentage of time spent freezing at 6 mo of age, day 2 contextual fear memory, 10 min test   [%]   3rd 2 min   cfm_6mo_bin3 F1 AD-BXD 50 both 23-25wks
Neuner1 65977 fear conditioning test (none) percentage of time spent freezing at 6 mo of age, day 2 contextual fear memory, 10 min test   [%]   4th 2 min   cfm_6mo_bin4 F1 AD-BXD 50 both 23-25wks
Neuner1 65978 fear conditioning test (none) percentage of time spent freezing at 6 mo of age, day 2 contextual fear memory, 10 min test   [%]   5th 2 min   cfm_6mo_bin5 F1 AD-BXD 50 both 23-25wks
Neuner1 65979 fear conditioning test (none) percentage of time spent freezing at 6 mo of age, day 2 contextual fear memory, 10 min test   [%]   total   cfm_6mo_total F1 AD-BXD 50 both 23-25wks (supplemental /
  summary measure)