MPD: Phenotype measures mapped to VT:0010139, immune response trait

Phenotype measures directly associated with ontology term
VT:0010139 'immune response trait'

This list only includes measures mapped to VT:0010139 directly. Measures mapped to its ontology descendants are not included. Alternatively, you can show measures mapped to VT:0010139 AND its descendants.

VT:0010435 response to bacterial infection trait
VT:0010436 response to fungal infection trait
VT:0010437 response to parasitic infection trait
VT:0010439 response to viral infection trait
VT:0010440 bacteria quantity
VT:0010441 parasite quantity
VT:0010997 response to Coronaviridae infection

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	Sex	Age	Sample Size (Avg)	Year
Farmer1:1	Farmer1	histopathology	(none)	severity of lesions in cecum [score] CecumSeverity 11301	QTL population	both	6wks	N=206	2001

Farmer1:2	Farmer1	histopathology	(none)	hyperplasia of cecum [score] CecumHyperplasia 11302	QTL population	both	6wks	N=206	2001

Farmer1:3	Farmer1	histopathology	(none)	ulceration in cecum [score] CecumUlceration 11303	QTL population	both	6wks	N=206	2001

Farmer1:4	Farmer1	histopathology	(none)	percentage of cecum damaged area [%] CecumDA 11304	QTL population	both	6wks	N=206	2001

Farmer1:5	Farmer1	histopathology	(none)	sum of cecum severity, hyperplasia, ulceration and damaged area scores [score] CecumTotalScore 11305	QTL population	both	6wks	N=206	2001

Farmer1:6	Farmer1	histopathology	(none)	percentage of proximal colon damaged area [%] ProxDA 11306	QTL population	both	6wks	N=206	2001

Farmer1:7	Farmer1	histopathology	(none)	severity of lesions in proximal colon [score] ProxSeverity 11307	QTL population	both	6wks	N=206	2001

Farmer1:8	Farmer1	histopathology	(none)	hyperplasia of proximal colon [score] ProxHyperplasia 11308	QTL population	both	6wks	N=206	2001

Farmer1:9	Farmer1	histopathology	(none)	ulceration in proximal colon [score] ProxUlceration 11309	QTL population	both	6wks	N=206	2001

Farmer1:10	Farmer1	histopathology	(none)	percentage of damaged area in mid colon [%] MidDA 11310	QTL population	both	6wks	N=206	2001

Farmer1:11	Farmer1	histopathology	(none)	severity of lesions in mid colon [score] MidSeverity 11311	QTL population	both	6wks	N=206	2001

Farmer1:12	Farmer1	histopathology	(none)	hyperplasia of mid colon [score] MidHyperplasia 11312	QTL population	both	6wks	N=206	2001

Farmer1:13	Farmer1	histopathology	(none)	ulcers and crypts frequency score [score] MidUlceration 11313	QTL population	both	6wks	N=206	2001

Farmer1:14	Farmer1	histopathology	(none)	percentage of damaged area in distal colon [%] DistalDA 11314	QTL population	both	6wks	N=206	2001

Farmer1:15	Farmer1	histopathology	(none)	severity of lesions in distal colon [score] DistalSeverity 11315	QTL population	both	6wks	N=206	2001

Farmer1:16	Farmer1	histopathology	(none)	hyperplasia of distal colon [score] DistalHyperplasia 11316	QTL population	both	6wks	N=206	2001

Farmer1:17	Farmer1	histopathology	(none)	ulceration in distal colon [score] DistalUlceration 11317	QTL population	both	6wks	N=206	2001

Farmer1:18	Farmer1	histopathology	(none)	proximal colon score [score] ProximalColon 11318	QTL population	both	6wks	N=206	2001

Farmer1:19	Farmer1	histopathology	(none)	middle colon score [score] MiddleColon 11319	QTL population	both	6wks	N=206	2001

Farmer1:20	Farmer1	histopathology	(none)	distal colon score [score] DistalColon 11320	QTL population	both	6wks	N=206	2001

Farmer1:21	Farmer1	histopathology	(none)	total score [score] ColonTotalScore 11321	QTL population	both	6wks	N=206	2001

Leiter2:1	Leiter2	health assessment	(none)	age of diabetes onset (dash = no diabetes) [wks] Onset 24001	QTL population	f	14-40wks	N=310	2009

Leiter2:2	Leiter2	health assessment	(none)	1 = diabetes, 0 = no diabetes [score] DB1_0 24002	QTL population	f	14-40wks	N=310	2009

Leiter2:3	Leiter2	histopathology	(none)	combination score of age at type 1 diabetes onset, and insulitis severity / extent (see excel file) [score] Insulities_TimeOnset 24003	QTL population	f	14-40wks	N=310	2009

Leiter2:4	Leiter2	histopathology	(none)	insulitis severity / extent score (0-4, see excel file) [score] Insulitis 24004	QTL population	f	14-40wks	N=310	2009

Leiter2:5	Leiter2	histopathology	(none)	group mice by insulitis score (0-3, see excel file) [score] GroupInsulitis_Diabetes 24005	QTL population	f	14-40wks	N=310	2009

Mahler1:2	Mahler1	histopathology	(none)	cecum assessment, first Principal Component CecumPC1 12102	QTL population	both	6wks	N=102	2002

Mahler1:3	Mahler1	histopathology	(none)	proximal colon assessment, first Principal Component ProxPC1 12103	QTL population	both	6wks	N=102	2002

Mahler1:4	Mahler1	histopathology	(none)	middle colon assessment, first Principal Component MidPC1 12104	QTL population	both	6wks	N=102	2002

Mahler1:5	Mahler1	histopathology	(none)	distal colon assessment, first Principal Component DistPC1 12105	QTL population	both	6wks	N=102	2002

Mahler1:6	Mahler1	histopathology	(none)	ulceration (score 0-4, increasing severity), first Principal Component Ulceration-PC1 12106	QTL population	both	6wks	N=102	2002

Mahler1:7	Mahler1	histopathology	(none)	ulceration (score 0-4, increasing severity), second Principal Component Ulceration-PC2 12107	QTL population	both	6wks	N=102	2002

Mathews1:1	Mathews1	histopathology	(none)	Clinical T1DM accompanied by end-stage insulitis before necropsy (score 0=non-diabetes, 1=diabetes) [score] IDDM 13401	QTL population	f	8-40wks	N=120	2003

Mathews1:2	Mathews1	histopathology	(none)	severity of diabetes (score 0=non-diabetes, 1=diabetes, 2=severe diabetes) [score] IDDM_VS_HI 13402	QTL population	f	8-40wks	N=120	2003

Mathews1:3	Mathews1	histopathology	(none)	Clinical T1DM accompanied by end-stage insulitis diagnosed at necropsy (score 0=non-diabetes, 1=diabetes) [score] IDM 13403	QTL population	f	8-40wks	N=120	2003

Mrug1:3	Mrug1	histopathology	(none)	cholangitis severity (score 0-4, increasing severity) 0 = no/minimal inflammation, 4=severe and extensive cholangiohepatitis [score] Cholangitis 17503	QTL population	both	10d	N=230	2005

Reifsnyder2:1	Reifsnyder2	histopathology	(none)	the week of clinical diabetes onset [n] Onset 17601	QTL population	f	12-40wks	N=185	2005

Reifsnyder2:2	Reifsnyder2	histopathology	(none)	insulitis score of diabetes-free mice, (from 0.002=virtually no insulitis, to 1.0=incipient diabetic) Insulitis_Index 17602	QTL population	f	12-40wks	N=185	2005

Reifsnyder2:3	Reifsnyder2	histopathology	(none)	first principal component of age at diabetes onset and severity/extent of insulitis Prin1 17603	QTL population	f	12-40wks	N=185	2005

Reifsnyder2:4	Reifsnyder2	histopathology	(none)	second principal component of age at diabetes onset and severity / extent of insulitis Prin2 17604	QTL population	f	12-40wks	N=185	2005

Sundberg2:1	Sundberg2	histopathology	(none)	Alopecia areata diagnosis (score 0=no alopecia, 1=alopecia) [score] alopecia_score 13501	QTL population	both	52wks	N=184	2003

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