Phenotype measures set

ID, description, units MPD:35128   respiratory cycle   [s]
methacholine study
Measures • saline    • 5 MCh    • 10 MCh    • 20 MCh    • response index
Data set, strains Berndt2   inbred   29 strains     sex: both     age: 9-12wks
Procedure plethysmography
Comparisonrepeated measures, baseline then treated multiple doses, same cohort
Ontology mappings



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Berndt2 - respiratory cycle

Female

Male



  RM-ANOVA, Q-Q NORMALITY ASSESSMENT

ANOVA Summary          "within" = Within error     "between" = Between Error (Animal ID)

Factor DF Sum of squares Mean sum of squares F value p-value (Pr>F)
between   sex 1 0.0315 0.0315 4.2253 0.0405
between   strain 28 4.2388 0.1514 20.3021 < 0.0001
between   sex:strain 28 0.3955 0.0141 1.894 0.0045
between   Residuals 412 3.0722 0.0075
within   group 3 0.0037 0.0012 0.3783 0.7687
within   group:sex 3 0.0132 0.0044 1.3435 0.2587
within   group:strain 84 2.0953 0.0249 7.6356 < 0.0001
within   group:sex:strain 84 0.3495 0.0042 1.2738 0.0529
within   Residuals 1236 4.0377 0.0033

Q-Q normality assessment based on residuals

  


  INDIVIDUAL MEASURES
ProjectIDDrug or
challenge
Description and varname PanelNo.
strains
SexAge
Berndt2 35128 plethysmography methacholine respiratory cycle   [s]   saline   tot_respi_saline inbred 29 both 9-12wks
Berndt2 35129 plethysmography methacholine respiratory cycle   [s]   5 MCh   tot_respi_mch5 inbred 29 both 9-12wks
Berndt2 35130 plethysmography methacholine respiratory cycle   [s]   10 MCh   tot_respi_mch10 inbred 29 both 9-12wks
Berndt2 35131 plethysmography methacholine respiratory cycle   [s]   20 MCh   tot_respi_mch20 inbred 29 both 9-12wks
Berndt2 35132 plethysmography methacholine respiratory cycle   [s]   response index   tot_respi_slope inbred 29 both 9-12wks (not included in the analysis / display)