MPD: Phenotype measures mapped to MP:0001186, pigmentation phenotype

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Phenotype measures associated with ontology term
MP:0001186 'pigmentation phenotype'

All measures in this list are mapped to the ontology descendants of MP:0001186. None are mapped to MP:0001186 directly.

MP:0002075 abnormal coat/hair pigmentation
MP:0002095 abnormal skin pigmentation
MP:0005102 abnormal iris pigmentation
MP:0005103 abnormal retinal pigmentation

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)	Year
Chang2:4	Chang2	ophthalmoscopy	(none)	retinal spots (multifocal circumscribed areas of hypopigmentation) [frequency rate] retinal_spots 42704	B6.PWD consomic w/par	28	both	44-61wks	N=9	2012

Hawes1:20	Hawes1	ophthalmoscopy	(none)	retinal hypopigmentation [frequency rate] ret_hypopig 26720	inbred w/CC7	40	both	6-7wks	N=10	2008

JaxKOMP-EAP:53	JaxKOMP-EAP	observation (SHIRPA)	(none)	coat color back coat_color_back 100347 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:54	JaxKOMP-EAP	observation (SHIRPA)	(none)	coat color head coat_color_head 100348 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:55	JaxKOMP-EAP	observation (SHIRPA)	(none)	coat color abdomen coat_color_abdomen 100349 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:56	JaxKOMP-EAP	observation (SHIRPA)	(none)	coat color pattern back coat_color_pattern_back 100350 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:57	JaxKOMP-EAP	observation (SHIRPA)	(none)	coat color pattern abdomen coat_color_pattern_abdomen coat_color_patterabdomen 100351 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:58	JaxKOMP-EAP	observation (SHIRPA)	(none)	coat color pattern head coat_color_pattern_head coat_color_patterhead 100352 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:101	JaxKOMP-EAP	observation (SHIRPA)	(none)	skin color whole body skin_color_whole_body 100395 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:102	JaxKOMP-EAP	observation (SHIRPA)	(none)	skin color snout skin_color_snout 100396 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:103	JaxKOMP-EAP	observation (SHIRPA)	(none)	skin color ear skin_color_ear 100397 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:104	JaxKOMP-EAP	observation (SHIRPA)	(none)	skin color front paws skin_color_front_paws 100398 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:105	JaxKOMP-EAP	observation (SHIRPA)	(none)	skin color back paws skin_color_back_paws 100399 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:106	JaxKOMP-EAP	observation (SHIRPA)	(none)	skin color tail skin_color_tail 100400 categorical	KOMP	2022	both	9wks		2021

JaxKOMP-EAP:287	JaxKOMP-EAP	ophthalmoscopy	(none)	iris pigmentation iris_pigmentation 100612 categorical	KOMP	2025	both	14wks		2021

JaxKOMP-LAP:42	JaxKOMP-LAP	observation (SHIRPA)	(none)	coat color back coat_color_back 101347 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:43	JaxKOMP-LAP	observation (SHIRPA)	(none)	coat color head coat_color_head 101348 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:44	JaxKOMP-LAP	observation (SHIRPA)	(none)	coat color abdomen coat_color_abdomen 101349 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:45	JaxKOMP-LAP	observation (SHIRPA)	(none)	coat color pattern back coat_color_pattern_back 101350 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:46	JaxKOMP-LAP	observation (SHIRPA)	(none)	coat color pattern abdomen coat_color_patterabdomen 101351 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:47	JaxKOMP-LAP	observation (SHIRPA)	(none)	coat color pattern head coat_color_patterhead 101352 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:90	JaxKOMP-LAP	observation (SHIRPA)	(none)	skin color whole body skin_color_whole_body 101395 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:91	JaxKOMP-LAP	observation (SHIRPA)	(none)	skin color snout skin_color_snout 101396 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:92	JaxKOMP-LAP	observation (SHIRPA)	(none)	skin color ear skin_color_ear 101397 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:93	JaxKOMP-LAP	observation (SHIRPA)	(none)	skin color front paws skin_color_front_paws 101398 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:94	JaxKOMP-LAP	observation (SHIRPA)	(none)	skin color back paws skin_color_back_paws 101399 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:95	JaxKOMP-LAP	observation (SHIRPA)	(none)	skin color tail skin_color_tail 101400 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:260	JaxKOMP-LAP	ophthalmoscopy	(none)	iris pigmentation iris_pigmentation 101612 categorical	KOMP	150	both	72-79wks		2021

Karst1:2	Karst1	colony observation	(none)	coat color (white = 0, black = 1) color 26002	QTL population		both	10wks	N=166	2011

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