Phenotype measures set:   Tarantino1   vel

ID, description, units MPD:45926   vel   average velocity, 30 min test   [cm/s]
cocaine study
Measures • baseline    • treated    • difference
Data set, strains Tarantino1   inbred   45 strains     sex: m     age: 8-11wks
Procedure open field test
Comparisonrepeated measures, baseline then treated, same cohort
Ontology mappings

  SIDE-BY-SIDE STRAIN CURVES
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Tarantino1 - average velocity, 30 min test


Female

Male



  OVERLAPPING STRAIN CURVES
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Tarantino1 - average velocity, 30 min test





  ANOVA, Q-Q NORMALITY ASSESSMENT

ANOVA Summary          "within" = Within error     "between" = Between Error (Animal ID)

Factor DF Sum of squares Mean sum of squares F value p-value (Pr>F)
between   strain 44 57831.6048 1314.3547 36.13 < 0.0001
between   Residuals 793 28848.114 36.3785
within   group 1 3665.8435 3665.8435 279.7285 < 0.0001
within   group:strain 44 4506.9426 102.4305 7.8161 < 0.0001
within   Residuals 793 10392.269 13.105

Q-Q normality assessment based on residuals

  


  INDIVIDUAL MEASURES
ProjectIDDrug or
challenge
Description and varname PanelStrains
tested
SexAge
Tarantino1 45926 open field test cocaine average velocity, 30 min test   [cm/s]   baseline (day 2)   vel_ctrl inbred 45 m 8-11wks
Tarantino1 45927 open field test cocaine average velocity, 30 min test   [cm/s]   treated (day 3)   vel_cocaine inbred 45 m 8-11wks
Tarantino1 45928 open field test cocaine average velocity, 30 min test   [cm/s]   difference   vel_diff inbred 45 m 8-11wks (not included in plot or analytics)