Phenotype measures set

ID, description, units MPD:35114   inspiratory phase   [s]
methacholine study
Measures • saline    • 5 MCh    • 10 MCh    • 20 MCh    • response index
Data set, strains Berndt2   inbred   29 strains     sex: both     age: 9-12wks
Procedure plethysmography
Comparisonrepeated measures, baseline then treated multiple doses, same cohort
Ontology mappings



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Berndt2 - inspiratory phase

Female

Male



  RM-ANOVA, Q-Q NORMALITY ASSESSMENT

ANOVA Summary          "within" = Within error     "between" = Between Error (Animal ID)

Factor DF Sum of squares Mean sum of squares F value p-value (Pr>F)
between   sex 1 0.0022 0.0022 5.1708 0.0235
between   strain 28 0.2587 0.0092 21.9042 < 0.0001
between   sex:strain 28 0.0187 0.0007 1.5796 0.0324
between   Residuals 412 0.1738 0.0004
within   group 3 0.0715 0.0238 107.1378 < 0.0001
within   group:sex 3 0.0009 0.0003 1.4074 0.239
within   group:strain 84 0.1352 0.0016 7.2346 < 0.0001
within   group:sex:strain 84 0.0241 0.0003 1.2883 0.0452
within   Residuals 1236 0.2749 0.0002

Q-Q normality assessment based on residuals

  


  INDIVIDUAL MEASURES
ProjectIDDrug or
challenge
Description and varname PanelNo.
strains
SexAge
Berndt2 35114 plethysmography methacholine inspiratory phase   [s]   saline   inspiratory_saline inbred 29 both 9-12wks
Berndt2 35115 plethysmography methacholine inspiratory phase   [s]   5 MCh   inspiratory_mch5 inbred 29 both 9-12wks
Berndt2 35116 plethysmography methacholine inspiratory phase   [s]   10 MCh   inspiratory_mch10 inbred 29 both 9-12wks
Berndt2 35117 plethysmography methacholine inspiratory phase   [s]   20 MCh   inspiratory_mch20 inbred 29 both 9-12wks
Berndt2 35118 plethysmography methacholine inspiratory phase   [s]   response index   inspiratory_slope inbred 29 both 9-12wks (not included in the analysis / display)