MPD: Phenotype measures mapped to MA:0002433, anatomic region

Phenotype measures in JaxKOMP-LAP associated with ontology term
MA:0002433 'anatomic region'

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All measures in this list are mapped to the ontology descendants of MA:0002433. None are mapped to MA:0002433 directly.

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)	Year
JaxKOMP-LAP:35	JaxKOMP-LAP	observation (SHIRPA)	(none)	tail presence tail_presence 101340 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:36	JaxKOMP-LAP	observation (SHIRPA)	(none)	tail length tail_length 101341 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:37	JaxKOMP-LAP	observation (SHIRPA)	(none)	tail thickness tail_thickness 101342 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:38	JaxKOMP-LAP	observation (SHIRPA)	(none)	tail morphology tail_morphology 101343 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:39	JaxKOMP-LAP	observation (SHIRPA)	(none)	tail curvature tail_curvature 101344 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:40	JaxKOMP-LAP	observation (SHIRPA)	(none)	tail shape tail_shape 101345 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:54	JaxKOMP-LAP	observation (SHIRPA)	(none)	forelimbs position forelimbs_position 101359 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:55	JaxKOMP-LAP	observation (SHIRPA)	(none)	forelimbs size forelimbs_size 101360 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:56	JaxKOMP-LAP	observation (SHIRPA)	(none)	forelimb footpads forelimb_footpads 101361 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:57	JaxKOMP-LAP	observation (SHIRPA)	(none)	hindlimbs position hindlimbs_position 101362 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:58	JaxKOMP-LAP	observation (SHIRPA)	(none)	hindlimbs shape hindlimbs_shape 101363 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:59	JaxKOMP-LAP	observation (SHIRPA)	(none)	hindlimbs footpads hindlimbs_footpad 101364 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:62	JaxKOMP-LAP	observation (SHIRPA)	(none)	head size head_size 101367 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:63	JaxKOMP-LAP	observation (SHIRPA)	(none)	head morphology head_morphology 101368 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:64	JaxKOMP-LAP	observation (SHIRPA)	(none)	eye morphology eyes 101369 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:65	JaxKOMP-LAP	observation (SHIRPA)	(none)	ear morphology ears 101370 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:66	JaxKOMP-LAP	observation (SHIRPA)	(none)	snout size snout_size 101371 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:68	JaxKOMP-LAP	observation (SHIRPA)	(none)	forepaw size forepaw_size 101373 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:69	JaxKOMP-LAP	observation (SHIRPA)	(none)	hindpaw size hindpaw_size 101374 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:70	JaxKOMP-LAP	observation (SHIRPA)	(none)	forepaw shape forepaw_shape 101375 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:71	JaxKOMP-LAP	observation (SHIRPA)	(none)	hindpaw shape hindpaw_shape 101376 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:72	JaxKOMP-LAP	observation (SHIRPA)	(none)	forepaw position forepaw_position 101377 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:73	JaxKOMP-LAP	observation (SHIRPA)	(none)	hindpaw position hindpaw_position 101378 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:74	JaxKOMP-LAP	observation (SHIRPA)	(none)	forelimb digit number forelimb_digit_number 101379 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:75	JaxKOMP-LAP	observation (SHIRPA)	(none)	hindlimb digit number hindlimb_digit_number 101380 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:76	JaxKOMP-LAP	observation (SHIRPA)	(none)	forelimb digit size forelimb_digit_size 101381 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:77	JaxKOMP-LAP	observation (SHIRPA)	(none)	hindlimb digit size hindlimb_digit_size 101382 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:78	JaxKOMP-LAP	observation (SHIRPA)	(none)	forelimb digit shape forelimb_digit_shape 101383 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:79	JaxKOMP-LAP	observation (SHIRPA)	(none)	hindlimb digit shape hindlimb_digit_shape 101384 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:80	JaxKOMP-LAP	observation (SHIRPA)	(none)	forelimb digit position forelimb_digit_position 101385 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:102	JaxKOMP-LAP	observation (SHIRPA)	(none)	teeth presence teeth_presence 101407 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:103	JaxKOMP-LAP	observation (SHIRPA)	(none)	upper teeth appearance upper_teeth_appearance 101408 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:104	JaxKOMP-LAP	observation (SHIRPA)	(none)	lower teeth appearance lower_teeth_appearance 101409 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:108	JaxKOMP-LAP	observation (SHIRPA)	(none)	mouth morphology mouth_morphology 101413 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:109	JaxKOMP-LAP	observation (SHIRPA)	(none)	upper lip morphology upper_lip_morphology 101414 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:111	JaxKOMP-LAP	observation (SHIRPA)	(none)	body thickness body_thickness 101416 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:112	JaxKOMP-LAP	observation (SHIRPA)	(none)	forelimbs shape forelimbs_shape 101417 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:113	JaxKOMP-LAP	observation (SHIRPA)	(none)	hindlimbs size hindlimbs_size 101418 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:114	JaxKOMP-LAP	observation (SHIRPA)	(none)	lower lip morphology lower_lip_morphology 101419 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:120	JaxKOMP-LAP	observation (SHIRPA)	(none)	tail elevation tail_elevation 101425 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:124	JaxKOMP-LAP	observation (SHIRPA)	(none)	trunk curl trunk_curl 101429 categorical	KOMP	148	both	66-72wks		2021

JaxKOMP-LAP:131	JaxKOMP-LAP	grip strength	(none)	forelimb grip strength by trial [g] front_paws forelimb_strength 101561 trial1 trial2 trial3	KOMP	119	both	66-72wks	N=8	2021

JaxKOMP-LAP:134	JaxKOMP-LAP	grip strength	(none)	forelimb and hindlimb grip strength by trial [g] all_paws forehind_limb_strength 101564 trial1 trial2 trial3	KOMP	119	both	66-72wks	N=8	2021

JaxKOMP-LAP:138	JaxKOMP-LAP	grip strength	(none)	forelimb grip strength (mean of trials) [g] font_paws_mean forelimb_grip_mean 101571 average average normalized to bw	KOMP	119	both	66-72wks	N=8	2021

JaxKOMP-LAP:140	JaxKOMP-LAP	grip strength	(none)	forelimb and hindlimb grip strength (mean of trials) [g] all_paws_mean fore_and_hind_limb_grip_mean 101572 average average normalized to bw	KOMP	119	both	66-72wks	N=8	2021

JaxKOMP-LAP:205	JaxKOMP-LAP	ECG	(none)	heart rate coefficient of variation (signal intensity) [%] HR_CV cv 101181 IMPC_ECG_003_001	KOMP	48	both	69-75wks	N=7	2019

JaxKOMP-LAP:206	JaxKOMP-LAP	ECG	(none)	heart rate, beats per min [n/min] HR hr 101182 IMPC_ECG_002_001	KOMP	48	both	69-75wks	N=7	2019

JaxKOMP-LAP:207	JaxKOMP-LAP	ECG	(none)	heart rate variability, mean of differences between sequential beats; beats per min [n/min] HR_V hrv 101183 IMPC_ECG_010_001	KOMP	48	both	69-75wks	N=7	2019

JaxKOMP-LAP:208	JaxKOMP-LAP	ECG	(none)	mean R amplitude, mean amplitude of signal measured from isoelectric line to peak of QRS [mV] R_amplitude mean_r_amplitude 101184 IMPC_ECG_013_001	KOMP	48	both	69-75wks	N=7	2019

JaxKOMP-LAP:209	JaxKOMP-LAP	ECG	(none)	mean SR amplitude, mean amplitude of signal measured from signal minimum line to peak of QRS [mV] SR_amplitude mean_sr_amplitude 101185 IMPC_ECG_012_001	KOMP	48	both	69-75wks	N=7	2019

JaxKOMP-LAP:210	JaxKOMP-LAP	ECG	(none)	number of signals [n] n 101186 IMPC_ECG_001_001	KOMP	48	both	69-75wks	N=7	2019

JaxKOMP-LAP:211	JaxKOMP-LAP	ECG	(none)	duration of PQ interval [ms] PQ pq 101187 IMPC_ECG_005_001	KOMP	48	both	69-75wks	N=7	2019

JaxKOMP-LAP:212	JaxKOMP-LAP	ECG	(none)	duration of PR interval [ms] PR pr 101188 IMPC_ECG_006_001	KOMP	48	both	69-75wks	N=7	2019

JaxKOMP-LAP:213	JaxKOMP-LAP	ECG	(none)	duration of QRS interval [ms] QRS qrs 101189 IMPC_ECG_007_001	KOMP	48	both	69-75wks	N=7	2019

JaxKOMP-LAP:214	JaxKOMP-LAP	ECG	(none)	duration of QT interval [ms] QT qt 101190	KOMP	48	both	69-75wks	N=7	2019

JaxKOMP-LAP:215	JaxKOMP-LAP	ECG	(none)	duration of QTC interval, calculated by dividing QT interval by square root of preceding RR interval [ms] QTc qtc 101191 IMPC_ECG_009_001	KOMP	48	both	69-75wks	N=7	2019

JaxKOMP-LAP:216	JaxKOMP-LAP	ECG	(none)	QTc dispersion, calculated as rate-corrected QT dispersion [ms] QTc_dispersion qtc_dispersion 101192 IMPC_ECG_011_001	KOMP	48	both	69-75wks	N=7	2019

JaxKOMP-LAP:217	JaxKOMP-LAP	ECG	(none)	QT dispersion, measured as inter-lead variability of QT intervals [ms] QT_dispersion qt_dispersion 101193	KOMP	48	both	69-75wks	N=7	2019

JaxKOMP-LAP:218	JaxKOMP-LAP	ECG	(none)	root mean square of successive differences of neighboring RR intervals [ms] rMSSD rmssd 101194 IMPC_ECG_014_001	KOMP	48	both	69-75wks	N=7	2019

JaxKOMP-LAP:219	JaxKOMP-LAP	ECG	(none)	duration of RR interval [ms] RR rr 101195 IMPC_ECG_004_001	KOMP	48	both	69-75wks	N=7	2019

JaxKOMP-LAP:220	JaxKOMP-LAP	ECG	(none)	duration of ST interval [ms] ST st 101196 IMPC_ECG_008_001	KOMP	48	both	69-75wks	N=7	2019

JaxKOMP-LAP:221	JaxKOMP-LAP	ECG	(none)	proportion of number pairs of successive beat-to-beat intervals that exceed 50 ms [%] pNN50 pnn50_6ms 101197 IMPC_ECG_015_001	KOMP	38	both	69-75wks	N=7	2019

JaxKOMP-LAP:248	JaxKOMP-LAP	ophthalmoscopy	(none)	eyes (present, absent) eye 101600 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:249	JaxKOMP-LAP	ophthalmoscopy	(none)	bulging eye bulging_eye 101601 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:250	JaxKOMP-LAP	ophthalmoscopy	(none)	eye hemorrhage or blood presence eye_hemorrhage_or_blood_presence 101602 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:251	JaxKOMP-LAP	ophthalmoscopy	(none)	eyelid morphology eyelid_morphology 101603 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:252	JaxKOMP-LAP	ophthalmoscopy	(none)	eye closure eye_closure 101604 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:253	JaxKOMP-LAP	ophthalmoscopy	(none)	narrow eye opening narrow_eye_opening 101605 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:254	JaxKOMP-LAP	ophthalmoscopy	(none)	cornea cornea 101606 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:255	JaxKOMP-LAP	ophthalmoscopy	(none)	irispupil irispupil 101607 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:256	JaxKOMP-LAP	ophthalmoscopy	(none)	pupil position pupil_position 101608 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:257	JaxKOMP-LAP	ophthalmoscopy	(none)	pupil shape pupil_shape 101609 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:258	JaxKOMP-LAP	ophthalmoscopy	(none)	pupil dilation pupil_dilation 101610 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:259	JaxKOMP-LAP	ophthalmoscopy	(none)	pupil light response pupil_light_response 101611 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:260	JaxKOMP-LAP	ophthalmoscopy	(none)	iris pigmentation iris_pigmentation 101612 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:261	JaxKOMP-LAP	slit lamp	(none)	lens lens 101613 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:262	JaxKOMP-LAP	slit lamp	(none)	lens opacity lens_opacity 101614 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:263	JaxKOMP-LAP	slit lamp	(none)	fusion between cornea and lens fusion_between_cornea_and_lens 101615 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:264	JaxKOMP-LAP	slit lamp	(none)	synechia synechia 101616 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:265	JaxKOMP-LAP	ophthalmoscopy	(none)	retina retina 101617 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:266	JaxKOMP-LAP	ophthalmoscopy	(none)	retinal pigmentation retinal_pigmentation 101618 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:267	JaxKOMP-LAP	ophthalmoscopy	(none)	retinal structure retinal_structure 101619 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:268	JaxKOMP-LAP	ophthalmoscopy	(none)	optic disc optic_disc 101620 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:269	JaxKOMP-LAP	ophthalmoscopy	(none)	retinal blood vessels retinal_blood_vessels 101621 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:270	JaxKOMP-LAP	ophthalmoscopy	(none)	persistence of hyaloid vascular system persistence_of_hyaloid_vascular_system 101622 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:271	JaxKOMP-LAP	ophthalmoscopy	(none)	retinal blood vessels pattern retinal_blood_vessels_pattern 101623 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:272	JaxKOMP-LAP	ophthalmoscopy	(none)	retinal blood vessels structure retinal_blood_vessels_structure 101625 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:273	JaxKOMP-LAP	slit lamp	(none)	cornea opacity cornea_opacity 101627 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:274	JaxKOMP-LAP	slit lamp	(none)	cornea vascularization cornea_vascularization 101628 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:275	JaxKOMP-LAP	slit lamp	(none)	corneal scleralization corneal_scleralization 101629 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:276	JaxKOMP-LAP	slit lamp	(none)	corneal deposits corneal_deposits 101630 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:277	JaxKOMP-LAP	slit lamp	(none)	iris transillumination iris_transillumination 101631 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:278	JaxKOMP-LAP	slit lamp	(none)	vitreous vitreous 101632 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:279	JaxKOMP-LAP	slit lamp	(none)	corneal mineralization corneal_mineralization 101633 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:280	JaxKOMP-LAP	slit lamp	(none)	corneal ulcer corneal_ulcer 101634 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:281	JaxKOMP-LAP	slit lamp	(none)	lacrimation lacrimation 101635 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:282	JaxKOMP-LAP	slit lamp	(none)	anterior chamber depth anterior_chamber_depth 101636 categorical	KOMP	150	both	72-79wks		2021

JaxKOMP-LAP:334	JaxKOMP-LAP	organ weights	(none)	heart weight [mg] heart_wt heart_weight 101583 weight normalized to body weight	KOMP	115	both	75-81wks	N=8	2021

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