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Examples
Phenotype measures associated with
ontology
term
MA:0000335 'colon'
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Data set
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Farmer1
(21)
Mahler1
(6)
Procedure / Protocol
Clear All
histopathology
(27)
Treatment
Clear All
(none)
(27)
Panel
Clear All
QTL population
(27)
Sex
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both
(27)
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Data set
Procedure / Protocol
Treatment
Phenotype Measure / Variable (click to view)
Panel
No. of Strains
Sex
Age
Sample Size (Avg)
Year
Farmer1:1
Farmer1
histopathology
(none)
severity of lesions in cecum [score]
CecumSeverity
11301
QTL population
both
6wks
N=206
2001
Farmer1:2
Farmer1
histopathology
(none)
hyperplasia of cecum [score]
CecumHyperplasia
11302
QTL population
both
6wks
N=206
2001
Farmer1:3
Farmer1
histopathology
(none)
ulceration in cecum [score]
CecumUlceration
11303
QTL population
both
6wks
N=206
2001
Farmer1:4
Farmer1
histopathology
(none)
percentage of cecum damaged area [%]
CecumDA
11304
QTL population
both
6wks
N=206
2001
Farmer1:5
Farmer1
histopathology
(none)
sum of cecum severity, hyperplasia, ulceration and damaged area scores [score]
CecumTotalScore
11305
QTL population
both
6wks
N=206
2001
Farmer1:6
Farmer1
histopathology
(none)
percentage of proximal colon damaged area [%]
ProxDA
11306
QTL population
both
6wks
N=206
2001
Farmer1:7
Farmer1
histopathology
(none)
severity of lesions in proximal colon [score]
ProxSeverity
11307
QTL population
both
6wks
N=206
2001
Farmer1:8
Farmer1
histopathology
(none)
hyperplasia of proximal colon [score]
ProxHyperplasia
11308
QTL population
both
6wks
N=206
2001
Farmer1:9
Farmer1
histopathology
(none)
ulceration in proximal colon [score]
ProxUlceration
11309
QTL population
both
6wks
N=206
2001
Farmer1:10
Farmer1
histopathology
(none)
percentage of damaged area in mid colon [%]
MidDA
11310
QTL population
both
6wks
N=206
2001
Farmer1:11
Farmer1
histopathology
(none)
severity of lesions in mid colon [score]
MidSeverity
11311
QTL population
both
6wks
N=206
2001
Farmer1:12
Farmer1
histopathology
(none)
hyperplasia of mid colon [score]
MidHyperplasia
11312
QTL population
both
6wks
N=206
2001
Farmer1:13
Farmer1
histopathology
(none)
ulcers and crypts frequency score [score]
MidUlceration
11313
QTL population
both
6wks
N=206
2001
Farmer1:14
Farmer1
histopathology
(none)
percentage of damaged area in distal colon [%]
DistalDA
11314
QTL population
both
6wks
N=206
2001
Farmer1:15
Farmer1
histopathology
(none)
severity of lesions in distal colon [score]
DistalSeverity
11315
QTL population
both
6wks
N=206
2001
Farmer1:16
Farmer1
histopathology
(none)
hyperplasia of distal colon [score]
DistalHyperplasia
11316
QTL population
both
6wks
N=206
2001
Farmer1:17
Farmer1
histopathology
(none)
ulceration in distal colon [score]
DistalUlceration
11317
QTL population
both
6wks
N=206
2001
Farmer1:18
Farmer1
histopathology
(none)
proximal colon score [score]
ProximalColon
11318
QTL population
both
6wks
N=206
2001
Farmer1:19
Farmer1
histopathology
(none)
middle colon score [score]
MiddleColon
11319
QTL population
both
6wks
N=206
2001
Farmer1:20
Farmer1
histopathology
(none)
distal colon score [score]
DistalColon
11320
QTL population
both
6wks
N=206
2001
Farmer1:21
Farmer1
histopathology
(none)
total score [score]
ColonTotalScore
11321
QTL population
both
6wks
N=206
2001
Mahler1:2
Mahler1
histopathology
(none)
cecum assessment, first Principal Component
CecumPC1
12102
QTL population
both
6wks
N=102
2002
Mahler1:3
Mahler1
histopathology
(none)
proximal colon assessment, first Principal Component
ProxPC1
12103
QTL population
both
6wks
N=102
2002
Mahler1:4
Mahler1
histopathology
(none)
middle colon assessment, first Principal Component
MidPC1
12104
QTL population
both
6wks
N=102
2002
Mahler1:5
Mahler1
histopathology
(none)
distal colon assessment, first Principal Component
DistPC1
12105
QTL population
both
6wks
N=102
2002
Mahler1:6
Mahler1
histopathology
(none)
ulceration (score 0-4, increasing severity), first Principal Component
Ulceration-PC1
12106
QTL population
both
6wks
N=102
2002
Mahler1:7
Mahler1
histopathology
(none)
ulceration (score 0-4, increasing severity), second Principal Component
Ulceration-PC2
12107
QTL population
both
6wks
N=102
2002
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