MPD: Phenotype measures mapped to MA:0000191, hippocampus

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Sample Size (Avg)	Year
Crusio1:48	Crusio1	histopathology	(none)	total hippocampus size (arbitrary units) hippocampus 62048 left right	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:50	Crusio1	histopathology	(none)	size of intra- and infrapyramidal mossy fibers (arbitrary units) iipmf 62050 left right	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:52	Crusio1	histopathology	(none)	percentage of hippocampus that is Intra- and infrapyramidal mossy fibers [%] iipmf_pct 62052 left right mean	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:55	Crusio1	histopathology	(none)	size of hilus (arbitrary units) hilus 62055 left right	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:57	Crusio1	histopathology	(none)	percentage of hippocampus that is hilus [%] hilus_pct 62057 left right mean	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:60	Crusio1	histopathology	(none)	size of suprapyramidal mossy fibers (arbitrary units) supra 62060 left right	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:62	Crusio1	histopathology	(none)	percentage of hippocampus that is suprapyramidal mossy fibers [%] supra_pct 62062 left right mean	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:65	Crusio1	histopathology	(none)	size of stratum pyramidale (arbitrary units) pyr 62065 left right	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:67	Crusio1	histopathology	(none)	percentage of hippocampus that is stratum pyramidale [%] pyr_pct 62067 left right mean	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:70	Crusio1	histopathology	(none)	size of stratum oriens (arbitrary units) oriens 62070 left right	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:72	Crusio1	histopathology	(none)	percentage of hippocampus that is stratum oriens [%] oriens_pct 62072 left right mean	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:75	Crusio1	histopathology	(none)	size of stratum radiatum (arbitrary units) rad 62075 left right	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:77	Crusio1	histopathology	(none)	percentage of hippocampus that is stratum radiatum [%] rad_pct 62077 left right mean	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:80	Crusio1	histopathology	(none)	size of stratum lacunosum-moleculare (arbitrary units) lacun 62080 left right	BXD w/par	55	both	12-16wks	N=4	2018

Crusio1:82	Crusio1	histopathology	(none)	percentage of hippocampus that is stratum lacunosum-moleculare [%] lacun_pct 62082 left right mean	BXD w/par	55	both	12-16wks	N=4	2018

Mooney1:2	Mooney1	protein activity assessment	(none)	dorsal hippocampus acetylcholinesterase activity [mU/mL] DH_AChE 110425	inbred	20	m	8-12wks	N=6	2019

Mooney1:3	Mooney1	protein activity assessment	(none)	ventral hippocampus acetylcholinesterase activity [mU/mL] VH_AChE 110426	inbred	20	m	8-12wks	N=6	2019

Schalkwyk2:1	Schalkwyk2	RNA expression profiling	(none)	miR-15b, hippocampal microRNA expression, relative miR15b 48101	BXD w/par	26	m	15-16wks	N=4	2012

Schalkwyk2:2	Schalkwyk2	RNA expression profiling	(none)	miR-31, hippocampal microRNA expression, relative miR31 48102	BXD w/par	26	m	15-16wks	N=4	2012

Schalkwyk2:3	Schalkwyk2	RNA expression profiling	(none)	miR-34c, hippocampal microRNA expression, relative miR34c 48103	BXD w/par	26	m	15-16wks	N=4	2012

Schalkwyk2:4	Schalkwyk2	RNA expression profiling	(none)	miR-212, hippocampal microRNA expression, relative miR212 48104	BXD w/par	26	m	15-16wks	N=4	2012

Schalkwyk2:5	Schalkwyk2	RNA expression profiling	(none)	miR-301a, hippocampal microRNA expression, relative miR301a 48105	BXD w/par	26	m	15-16wks	N=4	2012

Crusio1

histopathology

(none)

total hippocampus size (arbitrary units) hippocampus 62048 left right

BXD w/par

55

both

12-16wks

N=4

2018

Crusio1

histopathology

(none)

size of intra- and infrapyramidal mossy fibers (arbitrary units) iipmf 62050 left right

BXD w/par

55

both

12-16wks

N=4

2018

Crusio1

histopathology

(none)

percentage of hippocampus that is Intra- and infrapyramidal mossy fibers [%] iipmf_pct 62052 left right mean

BXD w/par

55

both

12-16wks

N=4

2018

Crusio1

histopathology

(none)

size of hilus (arbitrary units) hilus 62055 left right

BXD w/par

55

both

12-16wks

N=4

2018

Crusio1

histopathology

(none)

percentage of hippocampus that is hilus [%] hilus_pct 62057 left right mean

BXD w/par

55

both

12-16wks

N=4

2018

Crusio1

histopathology

(none)

size of suprapyramidal mossy fibers (arbitrary units) supra 62060 left right

BXD w/par

55

both

12-16wks

N=4

2018

Crusio1

histopathology

(none)

percentage of hippocampus that is suprapyramidal mossy fibers [%] supra_pct 62062 left right mean

BXD w/par

55

both

12-16wks

N=4

2018

Crusio1

histopathology

(none)

size of stratum pyramidale (arbitrary units) pyr 62065 left right

BXD w/par

55

both

12-16wks

N=4

2018

Crusio1

histopathology

(none)

percentage of hippocampus that is stratum pyramidale [%] pyr_pct 62067 left right mean

BXD w/par

55

both

12-16wks

N=4

2018

Crusio1

histopathology

(none)

size of stratum oriens (arbitrary units) oriens 62070 left right

BXD w/par

55

both

12-16wks

N=4

2018

Crusio1

histopathology

(none)

percentage of hippocampus that is stratum oriens [%] oriens_pct 62072 left right mean

BXD w/par

55

both

12-16wks

N=4

2018

Crusio1

histopathology

(none)

size of stratum radiatum (arbitrary units) rad 62075 left right

BXD w/par

55

both

12-16wks

N=4

2018

Crusio1

histopathology

(none)

percentage of hippocampus that is stratum radiatum [%] rad_pct 62077 left right mean

BXD w/par

55

both

12-16wks

N=4

2018

Crusio1

histopathology

(none)

size of stratum lacunosum-moleculare (arbitrary units) lacun 62080 left right

BXD w/par

55

both

12-16wks

N=4

2018

Crusio1

histopathology

(none)

percentage of hippocampus that is stratum lacunosum-moleculare [%] lacun_pct 62082 left right mean

BXD w/par

55

both

12-16wks

N=4

2018

Mooney1

protein activity assessment

(none)

dorsal hippocampus acetylcholinesterase activity [mU/mL] DH_AChE 110425

inbred

20

m

8-12wks

N=6

2019

Mooney1

protein activity assessment

(none)

ventral hippocampus acetylcholinesterase activity [mU/mL] VH_AChE 110426

inbred

20

m

8-12wks

N=6

2019

Schalkwyk2

RNA expression profiling

(none)

miR-15b, hippocampal microRNA expression, relative miR15b 48101

BXD w/par

26

m

15-16wks

N=4

2012

Schalkwyk2

RNA expression profiling

(none)

miR-31, hippocampal microRNA expression, relative miR31 48102

BXD w/par

26

m

15-16wks

N=4

2012

Schalkwyk2

RNA expression profiling

(none)

miR-34c, hippocampal microRNA expression, relative miR34c 48103

BXD w/par

26

m

15-16wks

N=4

2012

Schalkwyk2

RNA expression profiling

(none)

miR-212, hippocampal microRNA expression, relative miR212 48104

BXD w/par

26

m

15-16wks

N=4

2012

Schalkwyk2

RNA expression profiling

(none)

miR-301a, hippocampal microRNA expression, relative miR301a 48105

BXD w/par

26

m

15-16wks

N=4

2012

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