Schalkwyk2: Hippocampal microRNA expression in 24 BXD recombinant inbred strains of mice (2012)

Parsons MJ, Grimm C, Paya-Cano JL, Fernandes C, Liu L, Philip VM, Chesler EJ, Nietfeld W, Lehrach H, Schalkwyk LC. Genetic variation in hippocampal microRNA expression differences in C57BL/6 J X DBA/2 J (BXD) recombinant inbred mouse strains. BMC Genomics. 2012 Sep 13;13:476. doi: 10.1186/1471-2164-13-476.   PubMed 22974136     FullText


       
Schalkwyk2 downloads
• Download Schalkwyk2 strain means, SD, N, etc.     one row per strain/sex/measure
Participants Leonard C Schalkwyk       King's College London, Institute of Psychiatry London UK
Elissa J Chesler       The Jackson Laboratory Bar Harbor, ME
Cathy Fernandes       King's College London, Institute of Psychiatry London UK
Lin Liu       King's College London, Institute of Psychiatry London UK
Michael J Parsons       King's College London, Institute of Psychiatry London UK
Jose L Paya-Cano       King's College London, Institute of Psychiatry London UK
With: Grimm C, Nietfeld W, Lehrach H
ContactLeonard C Schalkwyk     Leonard.Schalkwyk@kcl.ac.uk     Lab web site
AcknowledgementsFunding provided by European New and Emerging Science and Technology program (NEST 028594)
Project type Phenotype strain survey data set
MPD identifiersSchalkwyk2     MPD:481
Data changelog No updates/corrections.       Initial release date: 06/2013.
Formatted citation
Click above to copy-paste the entire citation for this MPD web page.
Summary of procedures that were conducted
• RNA expression profiling Hippocampal microRNA expression. Normalized data.
Mice: BXD w/par   26 strains   ♂   age 15-16wks   1 cohort

Data set MPD ID Procedure / Protocol Drug or Challenge Phenotype Measure Panel No. of Strains Sex Age Sample Size (Avg)
    Schalkwyk2 48101 RNA expression profiling (none) miR-15b, hippocampal microRNA expression (relative)  miR15b BXD w/par 26 m 15-16wks N=4
    Schalkwyk2 48102 RNA expression profiling (none) miR-31, hippocampal microRNA expression (relative)  miR31 BXD w/par 26 m 15-16wks N=4
    Schalkwyk2 48103 RNA expression profiling (none) miR-34c, hippocampal microRNA expression (relative)  miR34c BXD w/par 26 m 15-16wks N=4
    Schalkwyk2 48104 RNA expression profiling (none) miR-212, hippocampal microRNA expression (relative)  miR212 BXD w/par 26 m 15-16wks N=4
    Schalkwyk2 48105 RNA expression profiling (none) miR-301a, hippocampal microRNA expression (relative)  miR301a BXD w/par 26 m 15-16wks N=4
    All boxes