MPD: Phenotype measures mapped to MA:0000006, head and neck

Phenotype measures in JaxKOMP-LAP associated with ontology term
MA:0000006 'head and neck'

All measures in this list are mapped to the ontology descendants of MA:0000006. None are mapped to MA:0000006 directly.

MA:0000023 head
MA:0000236 ear
MA:0000261 eye
MA:0000262 eye anterior chamber
MA:0000266 cornea
MA:0000268 eyelid
MA:0000273 iris
MA:0000275 lens
MA:0000276 retina
MA:0000278 optic disc
MA:0000348 tooth
MA:0001283 hyaloid vascular plexus
MA:0001292 pupil
MA:0001910 snout
MA:0002462 vitreous body
MA:0002474 mouth

Sort/ Pick	Data set	Procedure / Protocol	Treatment	Phenotype Measure / Variable (click to view)	Panel	No. of Strains	Sex	Age	Year
JaxKOMP-LAP:62	JaxKOMP-LAP	observation (SHIRPA)	(none)	head size head_size 101367 categorical	KOMP	148	both	66-72wks	2021

JaxKOMP-LAP:63	JaxKOMP-LAP	observation (SHIRPA)	(none)	head morphology head_morphology 101368 categorical	KOMP	148	both	66-72wks	2021

JaxKOMP-LAP:64	JaxKOMP-LAP	observation (SHIRPA)	(none)	eye morphology eyes 101369 categorical	KOMP	148	both	66-72wks	2021

JaxKOMP-LAP:65	JaxKOMP-LAP	observation (SHIRPA)	(none)	ear morphology ears 101370 categorical	KOMP	148	both	66-72wks	2021

JaxKOMP-LAP:66	JaxKOMP-LAP	observation (SHIRPA)	(none)	snout size snout_size 101371 categorical	KOMP	148	both	66-72wks	2021

JaxKOMP-LAP:102	JaxKOMP-LAP	observation (SHIRPA)	(none)	teeth presence teeth_presence 101407 categorical	KOMP	148	both	66-72wks	2021

JaxKOMP-LAP:103	JaxKOMP-LAP	observation (SHIRPA)	(none)	upper teeth appearance upper_teeth_appearance 101408 categorical	KOMP	148	both	66-72wks	2021

JaxKOMP-LAP:104	JaxKOMP-LAP	observation (SHIRPA)	(none)	lower teeth appearance lower_teeth_appearance 101409 categorical	KOMP	148	both	66-72wks	2021

JaxKOMP-LAP:108	JaxKOMP-LAP	observation (SHIRPA)	(none)	mouth morphology mouth_morphology 101413 categorical	KOMP	148	both	66-72wks	2021

JaxKOMP-LAP:109	JaxKOMP-LAP	observation (SHIRPA)	(none)	upper lip morphology upper_lip_morphology 101414 categorical	KOMP	148	both	66-72wks	2021

JaxKOMP-LAP:114	JaxKOMP-LAP	observation (SHIRPA)	(none)	lower lip morphology lower_lip_morphology 101419 categorical	KOMP	148	both	66-72wks	2021

JaxKOMP-LAP:248	JaxKOMP-LAP	ophthalmoscopy	(none)	eyes (present, absent) eye 101600 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:249	JaxKOMP-LAP	ophthalmoscopy	(none)	bulging eye bulging_eye 101601 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:250	JaxKOMP-LAP	ophthalmoscopy	(none)	eye hemorrhage or blood presence eye_hemorrhage_or_blood_presence 101602 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:251	JaxKOMP-LAP	ophthalmoscopy	(none)	eyelid morphology eyelid_morphology 101603 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:252	JaxKOMP-LAP	ophthalmoscopy	(none)	eye closure eye_closure 101604 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:253	JaxKOMP-LAP	ophthalmoscopy	(none)	narrow eye opening narrow_eye_opening 101605 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:254	JaxKOMP-LAP	ophthalmoscopy	(none)	cornea cornea 101606 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:255	JaxKOMP-LAP	ophthalmoscopy	(none)	irispupil irispupil 101607 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:256	JaxKOMP-LAP	ophthalmoscopy	(none)	pupil position pupil_position 101608 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:257	JaxKOMP-LAP	ophthalmoscopy	(none)	pupil shape pupil_shape 101609 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:258	JaxKOMP-LAP	ophthalmoscopy	(none)	pupil dilation pupil_dilation 101610 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:259	JaxKOMP-LAP	ophthalmoscopy	(none)	pupil light response pupil_light_response 101611 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:260	JaxKOMP-LAP	ophthalmoscopy	(none)	iris pigmentation iris_pigmentation 101612 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:261	JaxKOMP-LAP	slit lamp	(none)	lens lens 101613 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:262	JaxKOMP-LAP	slit lamp	(none)	lens opacity lens_opacity 101614 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:263	JaxKOMP-LAP	slit lamp	(none)	fusion between cornea and lens fusion_between_cornea_and_lens 101615 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:264	JaxKOMP-LAP	slit lamp	(none)	synechia synechia 101616 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:265	JaxKOMP-LAP	ophthalmoscopy	(none)	retina retina 101617 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:266	JaxKOMP-LAP	ophthalmoscopy	(none)	retinal pigmentation retinal_pigmentation 101618 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:267	JaxKOMP-LAP	ophthalmoscopy	(none)	retinal structure retinal_structure 101619 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:268	JaxKOMP-LAP	ophthalmoscopy	(none)	optic disc optic_disc 101620 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:269	JaxKOMP-LAP	ophthalmoscopy	(none)	retinal blood vessels retinal_blood_vessels 101621 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:270	JaxKOMP-LAP	ophthalmoscopy	(none)	persistence of hyaloid vascular system persistence_of_hyaloid_vascular_system 101622 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:271	JaxKOMP-LAP	ophthalmoscopy	(none)	retinal blood vessels pattern retinal_blood_vessels_pattern 101623 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:272	JaxKOMP-LAP	ophthalmoscopy	(none)	retinal blood vessels structure retinal_blood_vessels_structure 101625 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:273	JaxKOMP-LAP	slit lamp	(none)	cornea opacity cornea_opacity 101627 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:274	JaxKOMP-LAP	slit lamp	(none)	cornea vascularization cornea_vascularization 101628 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:275	JaxKOMP-LAP	slit lamp	(none)	corneal scleralization corneal_scleralization 101629 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:276	JaxKOMP-LAP	slit lamp	(none)	corneal deposits corneal_deposits 101630 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:277	JaxKOMP-LAP	slit lamp	(none)	iris transillumination iris_transillumination 101631 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:278	JaxKOMP-LAP	slit lamp	(none)	vitreous vitreous 101632 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:279	JaxKOMP-LAP	slit lamp	(none)	corneal mineralization corneal_mineralization 101633 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:280	JaxKOMP-LAP	slit lamp	(none)	corneal ulcer corneal_ulcer 101634 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:281	JaxKOMP-LAP	slit lamp	(none)	lacrimation lacrimation 101635 categorical	KOMP	150	both	72-79wks	2021

JaxKOMP-LAP:282	JaxKOMP-LAP	slit lamp	(none)	anterior chamber depth anterior_chamber_depth 101636 categorical	KOMP	150	both	72-79wks	2021

Filter Table Results