Phenotype measures set:   JaxCC1   distance_OF

ID, description, units MPD:89009   distance_OF   distance traveled   [cm]
Measures • 1st 5min    • 2nd 5min    • 3rd 5min    • 4th 5min
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 7-9wks
Procedure open field test
Comparisonrepeated measures, set of trials, same cohort
Ontology mappings

  SIDE-BY-SIDE STRAIN CURVES
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  OVERLAPPING STRAIN CURVES
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JaxCC1 - distance traveled





  ANOVA, Q-Q NORMALITY ASSESSMENT

ANOVA Summary          "within" = Within error     "between" = Between Error (Animal ID)

Factor DF Sum of squares Mean sum of squares F value p-value (Pr>F)
within   group 3 5789768.6145 1929922.8715 30.7309 < 0.0001
within   group:sex 3 614697.7519 204899.2506 3.2627 0.0211
within   group:strain 48 15997917.1974 333289.9416 5.3071 < 0.0001
within   group:sex:strain 48 3428091.6547 71418.5761 1.1372 0.2486
within   Residuals 645 40506419.7815 62800.6508
between   sex 1 4700477.3427 4700477.3427 20.9297 < 0.0001
between   strain 16 136335814.9922 8520988.437 37.9412 < 0.0001
between   sex:strain 16 9760745.4069 610046.5879 2.7163 0.0006
between   Residuals 215 48285575.0613 224584.0701

Q-Q normality assessment based on residuals

  


  INDIVIDUAL MEASURES
ProjectIDDrug or
challenge
Description and varname PanelStrains
tested
SexAge
JaxCC1 89009 open field test (none) distance traveled   [cm]   1st 5min   distance_1 CC 18 both 7-9wks
JaxCC1 89010 open field test (none) distance traveled   [cm]   2nd 5min   distance_2 CC 18 both 7-9wks
JaxCC1 89011 open field test (none) distance traveled   [cm]   3rd 5min   distance_3 CC 18 both 7-9wks
JaxCC1 89012 open field test (none) distance traveled   [cm]   4th 5min   distance_4 CC 18 both 7-9wks