Project measure / variable:   JaxCC1   distance_2

ID, description, units MPD:89010   distance_2   distance traveled   [cm]  2nd 5min  
Data set, strains JaxCC1   CC   18 strains     sex: both     age: 7-9wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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JaxCC1 - distance traveled 2nd 5min



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested18 strains17 strains
Mean of the strain means845.4   cm 846.2   cm
Median of the strain means851.1   cm 848.0   cm
SD of the strain means± 435.7 ± 416.0
Coefficient of variation (CV)0.5154 0.4917
Min–max range of strain means115.0   –   1766.0   cm 287.5   –   1611.0   cm
Mean sample size per strain6.9   mice 7.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 516039.88 516039.88 5.5907 0.0189
strain 16 39292856.6489 2455803.5406 26.6058 < 0.0001
sex:strain 16 2237022.8301 139813.9269 1.5147 0.0963
Residuals 215 19845181.7976 92303.1712


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 904.9 194.0   8 68.61 0.2144 704.0, 1291.0 0.14
CC002/UncJ m 963.9 209.0   7 78.99 0.2168 701.0, 1264.0 0.28
CC003/UncJ f 1059.0 193.9   5 86.74 0.1831 870.0, 1351.0 0.49
CC003/UncJ m 1249.0 308.6   4 154.3 0.247 899.0, 1640.0 0.97
CC004/TauUncJ f 1766.0 352.1   8 124.5 0.1994 1485.0, 2605.0 2.11
CC004/TauUncJ m 1611.0 266.7   8 94.28 0.1655 1139.0, 1946.0 1.84
CC006/TauUncJ f 978.5 374.0   4 187.0 0.3823 620.0, 1414.0 0.31
CC006/TauUncJ m 706.6 407.6   8 144.1 0.5769 158.0, 1340.0 -0.34
CC009/UncJ f 1229.0 408.3   8 144.4 0.3323 752.0, 1988.0 0.88
CC009/UncJ m 1394.0 595.4   8 210.5 0.427 920.0, 2527.0 1.32
CC010/GeniUncJ f 115.0 119.5   4 59.77 1.0394 4.0, 249.0 -1.68
CC013/GeniUncJ f 755.4 210.6   8 74.46 0.2788 348.0, 1011.0 -0.21
CC013/GeniUncJ m 1074.0 342.2   4 171.1 0.3187 646.0, 1357.0 0.55
CC017/UncJ f 1071.0 277.7   6 113.4 0.2593 661.0, 1485.0 0.52
CC017/UncJ m 1018.0 216.4   5 96.79 0.2127 712.0, 1226.0 0.41
CC018/UncJ f 1008.0 262.8   8 92.92 0.2607 605.0, 1355.0 0.37
CC018/UncJ m 1115.0 405.9   8 143.5 0.3641 714.0, 1819.0 0.65
CC019/TauUncJ f 817.5 261.6   8 92.48 0.32 230.0, 1070.0 -0.06
CC019/TauUncJ m 473.1 216.0   8 76.36 0.4565 250.0, 835.0 -0.9
CC024/GeniUncJ f 250.9 98.19   7 37.111 0.3914 146.0, 421.0 -1.36
CC024/GeniUncJ m 366.8 186.0   8 65.77 0.5072 151.0, 703.0 -1.15
CC025/GeniUncJ f 731.5 477.0   6 194.7 0.6521 133.0, 1226.0 -0.26
CC025/GeniUncJ m 371.3 446.2   10 141.1 1.2018 5.0, 1269.0 -1.14
CC026/GeniUncJ f 1603.0 361.4   8 127.8 0.2255 1225.0, 2386.0 1.74
CC026/GeniUncJ m 1377.0 149.3   8 52.8 0.1085 1225.0, 1611.0 1.28
CC032/GeniUncJ f 692.2 180.3   8 63.76 0.2605 471.0, 920.0 -0.35
CC032/GeniUncJ m 577.0 244.3   8 86.37 0.4234 216.0, 917.0 -0.65
CC040/TauUncJ f 884.8 320.7   8 113.4 0.3625 458.0, 1480.0 0.09
CC040/TauUncJ m 848.0 248.8   8 87.96 0.2934 473.0, 1244.0 0.0
CC041/TauUncJ f 276.0 226.9   8 80.21 0.822 12.0, 559.0 -1.31
CC041/TauUncJ m 287.5 230.2   8 81.4 0.8008 18.0, 638.0 -1.34
CC051/TauUncJ f 721.1 345.0   8 122.0 0.4784 73.0, 1095.0 -0.29
CC051/TauUncJ m 469.6 207.6   10 65.63 0.442 248.0, 934.0 -0.91
CC068/TauUncJ f 354.2 279.9   5 125.2 0.7903 31.0, 684.0 -1.13
CC068/TauUncJ m 482.8 187.2   8 66.19 0.3878 256.0, 795.0 -0.87


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 904.875 107.4146 1116.5955 693.1545
CC002/UncJ m 963.8571 114.831 1190.1959 737.5184
CC003/UncJ f 1059.0 135.8699 1326.8076 791.1924
CC003/UncJ m 1249.25 151.9072 1548.668 949.832
CC004/TauUncJ f 1766.125 107.4146 1977.8455 1554.4045
CC004/TauUncJ m 1611.25 107.4146 1822.9705 1399.5295
CC006/TauUncJ f 978.5 151.9072 1277.918 679.082
CC006/TauUncJ m 706.625 107.4146 918.3455 494.9045
CC009/UncJ f 1228.875 107.4146 1440.5955 1017.1545
CC009/UncJ m 1394.125 107.4146 1605.8455 1182.4045
CC013/GeniUncJ f 755.375 107.4146 967.0955 543.6545
CC013/GeniUncJ m 1073.75 151.9072 1373.168 774.332
CC017/UncJ f 1070.8333 124.0317 1315.3071 826.3595
CC017/UncJ m 1017.6 135.8699 1285.4076 749.7924
CC018/UncJ f 1008.0 107.4146 1219.7205 796.2795
CC018/UncJ m 1114.875 107.4146 1326.5955 903.1545
CC019/TauUncJ f 817.5 107.4146 1029.2205 605.7795
CC019/TauUncJ m 473.125 107.4146 684.8455 261.4045
CC024/GeniUncJ f 250.8571 114.831 477.1959 24.5184
CC024/GeniUncJ m 366.75 107.4146 578.4705 155.0295
CC025/GeniUncJ f 731.5 124.0317 975.9738 487.0262
CC025/GeniUncJ m 371.3 96.0745 560.6686 181.9314
CC026/GeniUncJ f 1602.625 107.4146 1814.3455 1390.9045
CC026/GeniUncJ m 1376.75 107.4146 1588.4705 1165.0295
CC032/GeniUncJ f 692.25 107.4146 903.9705 480.5295
CC032/GeniUncJ m 577.0 107.4146 788.7205 365.2795
CC040/TauUncJ f 884.75 107.4146 1096.4705 673.0295
CC040/TauUncJ m 848.0 107.4146 1059.7205 636.2795
CC041/TauUncJ f 276.0 107.4146 487.7205 64.2795
CC041/TauUncJ m 287.5 107.4146 499.2205 75.7795
CC051/TauUncJ f 721.125 107.4146 932.8455 509.4045
CC051/TauUncJ m 469.6 96.0745 658.9686 280.2314
CC068/TauUncJ f 354.2 135.8699 622.0076 86.3924
CC068/TauUncJ m 482.75 107.4146 694.4705 271.0295


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 934.3661 78.6194 1089.3296 779.4025
CC003/UncJ both 1154.125 101.9024 1354.9807 953.2693
CC004/TauUncJ both 1688.6875 75.9536 1838.3965 1538.9785
CC006/TauUncJ both 842.5625 93.0238 1025.9179 659.2071
CC009/UncJ both 1311.5 75.9536 1461.209 1161.791
CC013/GeniUncJ both 914.5625 93.0238 1097.9179 731.2071
CC017/UncJ both 1044.2167 91.9844 1225.5233 862.91
CC018/UncJ both 1061.4375 75.9536 1211.1465 911.7285
CC019/TauUncJ both 645.3125 75.9536 795.0215 495.6035
CC024/GeniUncJ both 308.8036 78.6194 463.7671 153.84
CC025/GeniUncJ both 551.4 78.4445 706.0188 396.7812
CC026/GeniUncJ both 1489.6875 75.9536 1639.3965 1339.9785
CC032/GeniUncJ both 634.625 75.9536 784.334 484.916
CC040/TauUncJ both 866.375 75.9536 1016.084 716.666
CC041/TauUncJ both 281.75 75.9536 431.459 132.041
CC051/TauUncJ both 595.3625 72.0559 737.3889 453.3361
CC068/TauUncJ both 418.475 86.6004 589.1695 247.7805




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA