Project measure / variable:   Shorter3   weaned_m

ID, description, units MPD:62302   weaned_m   number of weaned males   [n]  
Data set, strains Shorter3   CC diallel w/par   62 strains     sex: f     age: 3wks
Procedure colony observation
Ontology mappings

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  STRAIN COMPARISON PLOT
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Shorter3 - number of weaned males



  8-WAY DIALLEL CROSS VIEW
Female animals
129S ♂ A ♂ B6 ♂ CAST ♂ NOD ♂ NZO ♂ PWK ♂ WSB ♂
129S ♀ 2.45 3.24 3.34 2.33 2.76 3.93 2.63 3.08
A ♀ 2.78 2.45 3.05 2.62 3.24 2.89 3.00 2.60
B6 ♀ 3.86 4.29 2.91 3.73 4.61 3.21 4.19 3.33
CAST ♀ 2.79 2.62 2.46 2.42 2.48 2.74 2.47 2.44
NOD ♀ 3.03 4.32 4.33 4.08 3.57 4.36 4.76 3.72
NZO ♀ 3.48 3.10 3.14 — 3.21 2.78 — 3.12
PWK ♀ 2.31 2.41 2.48 2.52 2.24 2.96 2.22 2.62
WSB ♀ 2.57 2.00 2.45 1.88 2.92 2.60 2.17 1.86

Male animals
129S ♂ A ♂ B6 ♂ CAST ♂ NOD ♂ NZO ♂ PWK ♂ WSB ♂
129S ♀ — — — — — — — —
A ♀ — — — — — — — —
B6 ♀ — — — — — — — —
CAST ♀ — — — — — — — —
NOD ♀ — — — — — — — —
NZO ♀ — — — — — — — —
PWK ♀ — — — — — — — —
WSB ♀ — — — — — — — —

Cell coloring is based on strain mean Z-scores.     High-end         Mid         Low-end           Mouse over the cells to see additional info.


  MEASURE SUMMARY
Measure Summary Female
Number of strains tested62 strains
Mean of the strain means3.00   n
Median of the strain means2.84   n
SD of the strain means± 0.701
Coefficient of variation (CV)0.233
Min–max range of strain means1.86   –   4.76   n
Mean sample size per strain66.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 61 1876.6721 30.7651 11.4651 < 0.0001
Residuals 4386 11769.2431 2.6834


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 2.45 1.57   343 0.085 0.642 -0.79
129SAF1 f 3.24 1.81   29 0.335 0.557 0.34
129SB6F1 f 3.34 1.76   83 0.193 0.528 0.48
129SCASTF1 f 2.33 1.59   33 0.278 0.683 -0.96
129SNODF1 f 2.76 1.59   25 0.318 0.576 -0.35
129SNZOF1 f 3.93 1.33   27 0.256 0.338 1.0, 7.0 1.32
129SPWKF1 f 2.63 1.86   35 0.315 0.709 -0.53
129SWSBF1 f 3.08 1.61   39 0.258 0.524 0.11
A129SF1 f 2.78 1.57   37 0.257 0.562 -0.32
AB6F1 f 3.05 1.84   43 0.28 0.603 0.07
ACASTF1 f 2.62 1.71   24 0.35 0.653 -0.55
A/J f 2.45 1.54   198 0.109 0.627 -0.79
ANODF1 f 3.24 1.45   25 0.29 0.448 0.34
ANZOF1 f 2.89 1.68   18 0.395 0.58 -0.16
APWKF1 f 3.0 1.55   26 0.304 0.516 0.0
AWSBF1 f 2.6 1.58   35 0.266 0.606 -0.57
B6129SF1/J f 3.86 1.92   83 0.211 0.498 1.22
B6AF1/J f 4.29 2.3   34 0.395 0.536 1.0, 9.0 1.84
B6CASTF1 f 3.73 1.92   41 0.3 0.516 1.04
B6NODF1 f 4.61 1.76   31 0.317 0.382 2.29
B6NZOF1 f 3.21 1.93   19 0.443 0.602 0.3
B6PWKF1 f 4.19 1.8   63 0.227 0.43 1.69
B6WSBF1 f 3.33 2.08   42 0.321 0.624 0.47
C57BL/6J f 2.91 1.8   438 0.0862 0.619 -0.13
CAST129SF1 f 2.79 1.02   33 0.178 0.367 1.0, 5.0 -0.3
CASTAF1 f 2.62 1.02   34 0.174 0.388 1.0, 5.0 -0.55
CASTB6F1 f 2.46 1.28   92 0.133 0.521 -0.77
CAST/EiJ f 2.42 1.51   252 0.0952 0.624 -0.83
CASTNODF1 f 2.48 1.15   33 0.2 0.462 -0.75
CASTNZOF1 f 2.74 1.16   27 0.224 0.424 1.0, 5.0 -0.37
CASTPWKF1 f 2.47 1.39   76 0.159 0.562 -0.76
CASTWSBF1 f 2.44 1.31   43 0.201 0.538 -0.8
NOD129SF1 f 3.03 2.16   30 0.394 0.711 0.04
NODAF1 f 4.32 2.47   28 0.466 0.57 1.88
NODB6F1 f 4.33 2.31   52 0.32 0.533 1.89
NODCASTF1 f 4.08 2.61   36 0.435 0.64 1.54
NODNZOF1 f 4.36 2.79   22 0.594 0.639 1.94
NODPWKF1 f 4.76 1.72   37 0.283 0.362 1.0, 8.0 2.51
NOD/ShiLtJ f 3.57 1.8   213 0.123 0.504 0.81
NODWSBF1 f 3.72 2.26   36 0.377 0.608 1.02
NZO129SF1 f 3.48 1.57   21 0.342 0.451 0.68
NZOAF1 f 3.1 2.17   21 0.473 0.7 0.14
NZOB6F1 f 3.14 1.73   22 0.368 0.55 0.2
NZO/HlLtJ f 2.78 1.82   142 0.153 0.654 -0.32
NZONODF1 f 3.21 1.45   29 0.269 0.452 1.0, 5.0 0.3
NZOWSBF1 f 3.12 1.83   24 0.373 0.584 0.17
PWK129SF1 f 2.31 1.52   39 0.244 0.661 -0.99
PWKAF1 f 2.41 1.66   49 0.237 0.688 -0.85
PWKB6F1 f 2.48 1.72   56 0.229 0.691 -0.75
PWKCASTF1 f 2.52 1.57   58 0.206 0.624 -0.69
PWKNODF1 f 2.24 1.45   51 0.203 0.649 -1.09
PWKNZOF1 f 2.96 1.15   26 0.225 0.388 -0.06
PWK/PhJ f 2.22 1.44   364 0.0753 0.647 -1.12
PWKWSBF1 f 2.62 1.6   40 0.252 0.608 -0.55
WSB129SF1 f 2.57 1.37   37 0.224 0.532 -0.62
WSBAF1 f 2.0 1.43   44 0.216 0.715 -1.43
WSBB6F1 f 2.45 1.43   47 0.208 0.583 -0.79
WSBCASTF1 f 1.88 1.23   66 0.152 0.657 -1.6
WSB/EiJ f 1.86 1.35   341 0.0732 0.727 -1.63
WSBNODF1 f 2.92 1.33   39 0.212 0.453 -0.12
WSBNZOF1 f 2.6 1.28   30 0.233 0.491 -0.57
WSBPWKF1 f 2.17 1.33   87 0.143 0.613 -1.19


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 2.4519 0.0884 2.6253 2.2785
129SAF1 f 3.2414 0.3042 3.8377 2.645
129SB6F1 f 3.3373 0.1798 3.6899 2.9848
129SCASTF1 f 2.3333 0.2852 2.8924 1.7743
129SNODF1 f 2.76 0.3276 3.4023 2.1177
129SNZOF1 f 3.9259 0.3153 4.544 3.3079
129SPWKF1 f 2.6286 0.2769 3.1714 2.0857
129SWSBF1 f 3.0769 0.2623 3.5912 2.5627
A129SF1 f 2.7838 0.2693 3.3118 2.2558
AB6F1 f 3.0465 0.2498 3.5363 2.5568
ACASTF1 f 2.625 0.3344 3.2805 1.9695
A/J f 2.4495 0.1164 2.6777 2.2213
ANODF1 f 3.24 0.3276 3.8823 2.5977
ANZOF1 f 2.8889 0.3861 3.6458 2.1319
APWKF1 f 3.0 0.3213 3.6298 2.3702
AWSBF1 f 2.6 0.2769 3.1428 2.0572
B6129SF1/J f 3.8554 0.1798 4.2079 3.5029
B6AF1/J f 4.2941 0.2809 4.8449 3.7433
B6CASTF1 f 3.7317 0.2558 4.2333 3.2302
B6NODF1 f 4.6129 0.2942 5.1897 4.0361
B6NZOF1 f 3.2105 0.3758 3.9473 2.4738
B6PWKF1 f 4.1905 0.2064 4.5951 3.7859
B6WSBF1 f 3.3333 0.2528 3.8289 2.8378
C57BL/6J f 2.9132 0.0783 3.0667 2.7598
CAST129SF1 f 2.7879 0.2852 3.3469 2.2288
CASTAF1 f 2.6176 0.2809 3.1684 2.0669
CASTB6F1 f 2.4565 0.1708 2.7913 2.1217
CAST/EiJ f 2.4206 0.1032 2.6229 2.2183
CASTNODF1 f 2.4848 0.2852 3.0439 1.9258
CASTNZOF1 f 2.7407 0.3153 3.3588 2.1227
CASTPWKF1 f 2.4737 0.1879 2.8421 2.1053
CASTWSBF1 f 2.4419 0.2498 2.9316 1.9521
NOD129SF1 f 3.0333 0.2991 3.6197 2.447
NODAF1 f 4.3214 0.3096 4.9283 3.7145
NODB6F1 f 4.3269 0.2272 4.7723 3.8816
NODCASTF1 f 4.0833 0.273 4.6186 3.5481
NODNZOF1 f 4.3636 0.3492 5.0483 3.6789
NODPWKF1 f 4.7568 0.2693 5.2847 4.2288
NOD/ShiLtJ f 3.5681 0.1122 3.7881 3.348
NODWSBF1 f 3.7222 0.273 4.2575 3.187
NZO129SF1 f 3.4762 0.3575 4.177 2.7754
NZOAF1 f 3.0952 0.3575 3.796 2.3944
NZOB6F1 f 3.1364 0.3492 3.8211 2.4517
NZO/HlLtJ f 2.7817 0.1375 3.0512 2.5122
NZONODF1 f 3.2069 0.3042 3.8033 2.6105
NZOWSBF1 f 3.125 0.3344 3.7805 2.4695
PWK129SF1 f 2.3077 0.2623 2.8219 1.7934
PWKAF1 f 2.4082 0.234 2.8669 1.9494
PWKB6F1 f 2.4821 0.2189 2.9113 2.053
PWKCASTF1 f 2.5172 0.2151 2.9389 2.0956
PWKNODF1 f 2.2353 0.2294 2.685 1.7856
PWKNZOF1 f 2.9615 0.3213 3.5914 2.3317
PWK/PhJ f 2.2198 0.0859 2.3881 2.0515
PWKWSBF1 f 2.625 0.259 3.1328 2.1172
WSB129SF1 f 2.5676 0.2693 3.0955 2.0396
WSBAF1 f 2.0 0.247 2.4842 1.5158
WSBB6F1 f 2.4468 0.2389 2.9153 1.9784
WSBCASTF1 f 1.8788 0.2016 2.2741 1.4835
WSB/EiJ f 1.8592 0.0887 2.0332 1.6853
WSBNODF1 f 2.9231 0.2623 3.4373 2.4088
WSBNZOF1 f 2.6 0.2991 3.1863 2.0137
WSBPWKF1 f 2.1724 0.1756 2.5167 1.8281




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA