Project measure / variable:   Shorter3   weaned_f

ID, description, units MPD:62301   weaned_f   number of weaned females   [n]  
Data set, strains Shorter3   CC diallel w/par   62 strains     sex: f     age: 3wks
Procedure colony observation
Ontology mappings

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  STRAIN COMPARISON PLOT
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Shorter3 - number of weaned females



  8-WAY DIALLEL CROSS VIEW
Female animals
129S ♂ A ♂ B6 ♂ CAST ♂ NOD ♂ NZO ♂ PWK ♂ WSB ♂
129S ♀ 2.71 2.48 3.41 2.33 3.68 3.22 3.34 2.51
A ♀ 2.84 2.51 3.05 2.79 3.04 3.61 3.46 3.03
B6 ♀ 3.48 3.41 3.00 3.93 3.55 4.42 4.03 4.12
CAST ♀ 2.48 2.59 2.27 2.31 2.58 2.52 2.57 2.60
NOD ♀ 3.47 3.57 3.63 3.08 3.77 4.27 4.32 3.61
NZO ♀ 3.57 3.33 3.18 — 4.21 3.03 — 3.79
PWK ♀ 2.85 2.43 2.55 2.93 2.75 2.65 2.41 3.15
WSB ♀ 2.35 2.05 2.19 1.83 2.90 2.23 2.20 1.79

Male animals
129S ♂ A ♂ B6 ♂ CAST ♂ NOD ♂ NZO ♂ PWK ♂ WSB ♂
129S ♀ — — — — — — — —
A ♀ — — — — — — — —
B6 ♀ — — — — — — — —
CAST ♀ — — — — — — — —
NOD ♀ — — — — — — — —
NZO ♀ — — — — — — — —
PWK ♀ — — — — — — — —
WSB ♀ — — — — — — — —

Cell coloring is based on strain mean Z-scores.     High-end         Mid         Low-end           Mouse over the cells to see additional info.


  MEASURE SUMMARY
Measure Summary Female
Number of strains tested62 strains
Mean of the strain means3.03   n
Median of the strain means3.01   n
SD of the strain means± 0.650
Coefficient of variation (CV)0.214
Min–max range of strain means1.79   –   4.42   n
Mean sample size per strain66.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 61 1694.2695 27.7749 10.3429 < 0.0001
Residuals 4386 11778.2033 2.6854


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 2.71 1.57   343 0.0849 0.581 -0.49
129SAF1 f 2.48 1.45   29 0.27 0.586 -0.85
129SB6F1 f 3.41 1.54   83 0.169 0.451 1.0, 7.0 0.58
129SCASTF1 f 2.33 1.43   33 0.249 0.612 -1.08
129SNODF1 f 3.68 1.77   25 0.355 0.482 1.0, 7.0 1.0
129SNZOF1 f 3.22 1.55   27 0.299 0.482 0.29
129SPWKF1 f 3.34 1.86   35 0.315 0.557 0.47
129SWSBF1 f 2.51 1.37   39 0.22 0.547 -0.8
A129SF1 f 2.84 1.82   37 0.299 0.641 -0.29
AB6F1 f 3.05 1.99   43 0.303 0.652 0.03
ACASTF1 f 2.79 1.77   24 0.361 0.634 -0.37
A/J f 2.51 1.42   198 0.101 0.567 -0.8
ANODF1 f 3.04 1.54   25 0.308 0.507 1.0, 7.0 0.01
ANZOF1 f 3.61 1.94   18 0.458 0.538 1.0, 7.0 0.89
APWKF1 f 3.46 1.94   26 0.381 0.562 1.0, 7.0 0.66
AWSBF1 f 3.03 2.18   35 0.368 0.718 0.0
B6129SF1/J f 3.48 1.83   83 0.201 0.526 0.69
B6AF1/J f 3.41 1.92   34 0.33 0.564 0.58
B6CASTF1 f 3.93 1.75   41 0.274 0.446 1.38
B6NODF1 f 3.55 1.91   31 0.343 0.539 0.8
B6NZOF1 f 4.42 2.67   19 0.613 0.605 1.0, 12.0 2.14
B6PWKF1 f 4.03 1.58   63 0.199 0.391 1.0, 8.0 1.54
B6WSBF1 f 4.12 1.77   42 0.273 0.43 1.0, 7.0 1.67
C57BL/6J f 3.0 1.81   438 0.0864 0.602 -0.05
CAST129SF1 f 2.48 1.09   33 0.19 0.44 1.0, 5.0 -0.85
CASTAF1 f 2.59 1.37   34 0.236 0.531 -0.68
CASTB6F1 f 2.27 1.35   92 0.141 0.595 -1.17
CAST/EiJ f 2.31 1.35   252 0.0851 0.585 -1.11
CASTNODF1 f 2.58 1.32   33 0.23 0.514 -0.69
CASTNZOF1 f 2.52 1.16   27 0.222 0.459 -0.79
CASTPWKF1 f 2.57 1.37   76 0.157 0.534 -0.71
CASTWSBF1 f 2.6 1.22   43 0.186 0.468 -0.66
NOD129SF1 f 3.47 2.61   30 0.476 0.753 0.67
NODAF1 f 3.57 2.56   28 0.484 0.717 0.83
NODB6F1 f 3.63 2.04   52 0.283 0.561 0.92
NODCASTF1 f 3.08 1.81   36 0.302 0.587 0.07
NODNZOF1 f 4.27 2.49   22 0.531 0.583 1.91
NODPWKF1 f 4.32 2.39   37 0.393 0.553 1.0, 9.0 1.98
NOD/ShiLtJ f 3.77 2.02   213 0.139 0.537 1.14
NODWSBF1 f 3.61 2.51   36 0.418 0.695 0.89
NZO129SF1 f 3.57 1.89   21 0.412 0.528 1.0, 8.0 0.83
NZOAF1 f 3.33 2.11   21 0.459 0.632 0.46
NZOB6F1 f 3.18 1.87   22 0.398 0.587 0.23
NZO/HlLtJ f 3.03 1.74   142 0.146 0.575 0.0
NZONODF1 f 4.21 1.72   29 0.319 0.409 1.0, 8.0 1.81
NZOWSBF1 f 3.79 1.64   24 0.335 0.433 1.17
PWK129SF1 f 2.85 1.61   39 0.259 0.567 -0.28
PWKAF1 f 2.43 1.46   49 0.208 0.6 -0.93
PWKB6F1 f 2.55 1.68   56 0.225 0.659 -0.74
PWKCASTF1 f 2.93 1.78   58 0.233 0.606 -0.16
PWKNODF1 f 2.75 1.49   51 0.209 0.544 -0.43
PWKNZOF1 f 2.65 1.85   26 0.363 0.698 -0.59
PWK/PhJ f 2.41 1.46   364 0.0767 0.607 -0.96
PWKWSBF1 f 3.15 1.55   40 0.244 0.49 0.18
WSB129SF1 f 2.35 1.4   37 0.23 0.595 -1.05
WSBAF1 f 2.05 1.46   44 0.22 0.715 -1.51
WSBB6F1 f 2.19 1.23   47 0.179 0.56 -1.3
WSBCASTF1 f 1.83 1.27   66 0.157 0.694 -1.85
WSB/EiJ f 1.79 1.23   341 0.0664 0.685 -1.91
WSBNODF1 f 2.9 1.37   39 0.22 0.474 -0.2
WSBNZOF1 f 2.23 1.3   30 0.238 0.584 -1.23
WSBPWKF1 f 2.2 1.37   87 0.147 0.625 -1.28


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 2.7055 0.0885 2.879 2.5321
129SAF1 f 2.4828 0.3043 3.0793 1.8862
129SB6F1 f 3.4096 0.1799 3.7623 3.057
129SCASTF1 f 2.3333 0.2853 2.8926 1.7741
129SNODF1 f 3.68 0.3277 4.3225 3.0375
129SNZOF1 f 3.2222 0.3154 3.8405 2.6039
129SPWKF1 f 3.3429 0.277 3.8859 2.7998
129SWSBF1 f 2.5128 0.2624 3.0273 1.9984
A129SF1 f 2.8378 0.2694 3.366 2.3097
AB6F1 f 3.0465 0.2499 3.5364 2.5566
ACASTF1 f 2.7917 0.3345 3.4475 2.1359
A/J f 2.5051 0.1165 2.7334 2.2767
ANODF1 f 3.04 0.3277 3.6825 2.3975
ANZOF1 f 3.6111 0.3863 4.3684 2.8539
APWKF1 f 3.4615 0.3214 4.0916 2.8315
AWSBF1 f 3.0286 0.277 3.5716 2.4855
B6129SF1/J f 3.4819 0.1799 3.8346 3.1293
B6AF1/J f 3.4118 0.281 3.9627 2.8608
B6CASTF1 f 3.9268 0.2559 4.4286 3.4251
B6NODF1 f 3.5484 0.2943 4.1254 2.9714
B6NZOF1 f 4.4211 0.3759 5.1581 3.684
B6PWKF1 f 4.0317 0.2065 4.4365 3.627
B6WSBF1 f 4.119 0.2529 4.6148 3.6233
C57BL/6J f 3.0023 0.0783 3.1558 2.8488
CAST129SF1 f 2.4848 0.2853 3.0441 1.9256
CASTAF1 f 2.5882 0.281 3.1392 2.0373
CASTB6F1 f 2.2717 0.1708 2.6067 1.9368
CAST/EiJ f 2.3095 0.1032 2.5119 2.1071
CASTNODF1 f 2.5758 0.2853 3.135 2.0165
CASTNZOF1 f 2.5185 0.3154 3.1368 1.9002
CASTPWKF1 f 2.5658 0.188 2.9343 2.1973
CASTWSBF1 f 2.6047 0.2499 3.0946 2.1147
NOD129SF1 f 3.4667 0.2992 4.0532 2.8801
NODAF1 f 3.5714 0.3097 4.1786 2.9643
NODB6F1 f 3.6346 0.2272 4.0801 3.1891
NODCASTF1 f 3.0833 0.2731 3.6188 2.5479
NODNZOF1 f 4.2727 0.3494 4.9577 3.5878
NODPWKF1 f 4.3243 0.2694 4.8525 3.7962
NOD/ShiLtJ f 3.7653 0.1123 3.9854 3.5451
NODWSBF1 f 3.6111 0.2731 4.1466 3.0757
NZO129SF1 f 3.5714 0.3576 4.2725 2.8704
NZOAF1 f 3.3333 0.3576 4.0344 2.6323
NZOB6F1 f 3.1818 0.3494 3.8668 2.4969
NZO/HlLtJ f 3.0282 0.1375 3.2978 2.7586
NZONODF1 f 4.2069 0.3043 4.8035 3.6103
NZOWSBF1 f 3.7917 0.3345 4.4475 3.1359
PWK129SF1 f 2.8462 0.2624 3.3606 2.3317
PWKAF1 f 2.4286 0.2341 2.8875 1.9696
PWKB6F1 f 2.5536 0.219 2.9829 2.1243
PWKCASTF1 f 2.931 0.2152 3.3529 2.5092
PWKNODF1 f 2.7451 0.2295 3.195 2.2952
PWKNZOF1 f 2.6538 0.3214 3.2839 2.0238
PWK/PhJ f 2.4121 0.0859 2.5805 2.2437
PWKWSBF1 f 3.15 0.2591 3.658 2.642
WSB129SF1 f 2.3514 0.2694 2.8795 1.8232
WSBAF1 f 2.0455 0.247 2.5298 1.5611
WSBB6F1 f 2.1915 0.239 2.6601 1.7229
WSBCASTF1 f 1.8333 0.2017 2.2288 1.4379
WSB/EiJ f 1.7889 0.0887 1.9628 1.6149
WSBNODF1 f 2.8974 0.2624 3.4119 2.383
WSBNZOF1 f 2.2333 0.2992 2.8199 1.6468
WSBPWKF1 f 2.1954 0.1757 2.5398 1.851




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA