Project measure / variable:   Gould3   FC_context_3

ID, description, units MPD:47347   FC_context_3   withdrawal study group, percent immobility in training chamber, 24h after fear conditioning   [%]  dose 3 mg  
nicotine study
Data set, strains Gould3   inbred   8 strains     sex: m     age: 8-12wks
Procedure fear conditioning test
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  STRAIN COMPARISON PLOT
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Gould3 - withdrawal study group, percent immobility in training chamber, 24h after fear conditioning dose 3 mg



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means34.1   %
Median of the strain means28.5   %
SD of the strain means± 14.7
Coefficient of variation (CV)0.432
Min–max range of strain means20.0   –   59.7   %
Mean sample size per strain10.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 15569.2537 2224.1791 26.8626 < 0.0001
Residuals 76 6292.6761 82.7984


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S6/SvEvTac m 59.7 5.09   10 1.61 0.0853 53.3, 66.7 1.74
A/J m 51.3 14.4   10 4.56 0.281 20.0, 76.7 1.17
BALB/cByJ m 32.7 10.5   10 3.33 0.322 13.3, 50.0 -0.1
C3H/HeJ m 20.0 8.75   10 2.77 0.438 3.3, 33.3 -0.96
C57BL/6J m 39.0 8.46   10 2.68 0.217 23.3, 53.3 0.33
CBA/J m 24.0 10.8   10 3.4 0.448 3.3, 40.0 -0.69
DBA/1J m 22.0 4.21   10 1.33 0.191 16.7, 30.0 -0.82
DBA/2J m 24.3 7.1   14 1.9 0.292 13.3, 36.7 -0.67


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S6/SvEvTac m 59.67 2.8775 65.401 53.939
A/J m 51.33 2.8775 57.061 45.599
BALB/cByJ m 32.67 2.8775 38.401 26.939
C3H/HeJ m 20.0 2.8775 25.731 14.269
C57BL/6J m 38.98 2.8775 44.711 33.249
CBA/J m 24.0 2.8775 29.731 18.269
DBA/1J m 22.0 2.8775 27.731 16.269
DBA/2J m 24.2857 2.4319 29.1293 19.4422




  GWAS USING LINEAR MIXED MODELS