Project measure / variable:   Gould2   FC_immediate_chr_12

ID, description, units MPD:47152   FC_immediate_chr_12   chronic group, conditioning: immediate fear   [%]  nicotine  
nicotine study
Data set, strains Gould2   inbred   8 strains     sex: m     age:
Procedure fear conditioning test
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  STRAIN COMPARISON PLOT
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Gould2 - chronic group, conditioning: immediate fear nicotine



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means14.6   %
Median of the strain means12.5   %
SD of the strain means± 15.2
Coefficient of variation (CV)1.05
Min–max range of strain means0   –   40.0   %
Mean sample size per strain9.9   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 16051.6808 2293.0973 25.8279 < 0.0001
Residuals 71 6303.64 88.7837


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S6/SvEvTac m 22.5 15.2   10 4.82 0.677 0.52
A/J m 23.3 10.2   10 3.23 0.438 0.57
BALB/cByJ m 0.0 0.0   9 0.0 0.0 -0.96
C3H/HeJ m 2.49 4.01   10 1.27 1.61 -0.79
C57BL/6J m 1.66 3.5   10 1.11 2.11 -0.85
CBA/J m 0.83 2.62   10 0.83 3.16 -0.9
DBA/1J m 25.8 14.4   10 4.56 0.559 8.3, 50.0 0.74
DBA/2J m 40.0 11.0   10 3.47 0.274 25.0, 58.3 1.67


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S6/SvEvTac m 22.51 2.9797 28.4513 16.5687
A/J m 23.33 2.9797 29.2713 17.3887
BALB/cByJ m 0.0 3.1408 6.2626 -6.2626
C3H/HeJ m 2.49 2.9797 8.4313 -3.4513
C57BL/6J m 1.66 2.9797 7.6013 -4.2813
CBA/J m 0.83 2.9797 6.7713 -5.1113
DBA/1J m 25.82 2.9797 31.7613 19.8787
DBA/2J m 40.0 2.9797 45.9413 34.0587




  GWAS USING LINEAR MIXED MODELS