Project measure / variable:   Gould2   FC_CS_acu_09

ID, description, units MPD:47148   FC_CS_acu_09   acute group, percent immobility in altered context chamber, cue   [%]  dose: 0.09 mg  
nicotine study
Data set, strains Gould2   inbred   8 strains     sex: m     age:
Procedure fear conditioning test
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  STRAIN COMPARISON PLOT
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Gould2 - acute group, percent immobility in altered context chamber, cue dose: 0.09 mg



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested8 strains
Mean of the strain means59.0   %
Median of the strain means59.1   %
SD of the strain means± 16.9
Coefficient of variation (CV)0.287
Min–max range of strain means38.1   –   90.0   %
Mean sample size per strain10.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 7 21879.1768 3125.5967 15.0864 < 0.0001
Residuals 76 15745.6427 207.1795


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S6/SvEvTac m 90.0 10.7   10 3.39 0.119 72.2, 100.0 1.83
A/J m 46.3 16.0   9 5.32 0.345 22.2, 72.2 -0.75
BALB/cByJ m 67.2 19.7   10 6.22 0.293 27.8, 94.4 0.49
C3H/HeJ m 63.3 14.4   10 4.55 0.227 44.4, 83.3 0.25
C57BL/6J m 68.8 11.7   13 3.24 0.17 44.4, 88.9 0.58
CBA/J m 54.9 12.8   8 4.51 0.232 38.9, 72.2 -0.24
DBA/1J m 38.1 12.3   14 3.29 0.323 16.7, 61.1 -1.23
DBA/2J m 43.3 16.9   10 5.35 0.391 16.7, 61.1 -0.93


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S6/SvEvTac m 90.0 4.5517 99.0655 80.9345
A/J m 46.2889 4.7979 55.8448 36.733
BALB/cByJ m 67.22 4.5517 76.2855 58.1545
C3H/HeJ m 63.33 4.5517 72.3955 54.2645
C57BL/6J m 68.8154 3.9921 76.7663 60.8644
CBA/J m 54.8625 5.089 64.998 44.727
DBA/1J m 38.0857 3.8469 45.7475 30.424
DBA/2J m 43.34 4.5517 52.4055 34.2745




  GWAS USING LINEAR MIXED MODELS