Project measure / variable:   Tarantino1   rear_ctrl

ID, description, units MPD:45921   rear_ctrl   rearing episodes, 30 min test   [n]  baseline (day 2)  
cocaine study
Data set, strains Tarantino1   inbred   45 strains     sex: m     age:
Procedure open field test
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  STRAIN COMPARISON PLOT
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Tarantino1 - rearing episodes, 30 min test baseline (day 2)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested45 strains
Mean of the strain means155   n
Median of the strain means130   n
SD of the strain means± 103
Coefficient of variation (CV)0.665
Min–max range of strain means1.35   –   422   n
Mean sample size per strain18.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 44 8513732.0502 193493.9102 28.1446 < 0.0001
Residuals 795 5465627.0736 6875.0026


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 1.35 1.18   20 0.264 0.876 -1.49
A/J m 23.9 26.4   23 5.5 1.11 1.0, 120.0 -1.27
AKR/J m 135.0 71.7   20 16.0 0.532 16.0, 303.0 -0.2
BALB/cByJ m 164.0 84.4   18 19.9 0.516 12.0, 337.0 0.08
BTBR T+ Itpr3tf/J m 44.7 34.6   19 7.95 0.775 2.0, 109.0 -1.07
BUB/BnJ m 278.0 71.7   17 17.4 0.258 131.0, 390.0 1.19
C3H/HeJ m 178.0 59.8   20 13.4 0.336 98.0, 326.0 0.22
C57BL/6J m 177.0 87.7   52 12.2 0.494 1.0, 390.0 0.21
C57BLKS/J m 88.1 36.7   20 8.21 0.417 38.0, 174.0 -0.65
C57BR/cdJ m 243.0 58.3   16 14.6 0.24 148.0, 340.0 0.85
C57L/J m 261.0 123.0   18 29.0 0.471 85.0, 580.0 1.02
C58/J m 320.0 258.0   16 64.4 0.806 106.0, 998.0 1.6
CBA/J m 59.9 63.3   20 14.2 1.06 1.0, 215.0 -0.92
CE/J m 126.0 45.7   18 10.8 0.362 49.0, 240.0 -0.28
CZECHII/EiJ m 97.1 76.6   18 18.1 0.789 21.0, 280.0 -0.56
DBA/2J m 135.0 82.6   18 19.5 0.612 1.0, 337.0 -0.2
DDY/JclSidSeyFrkJ m 130.0 80.3   16 20.1 0.62 45.0, 334.0 -0.25
FVB/NJ m 315.0 182.0   20 40.7 0.577 2.0, 598.0 1.55
I/LnJ m 121.0 54.2   15 14.0 0.449 63.0, 259.0 -0.33
KK/HlJ m 102.0 67.2   15 17.3 0.657 10.0, 307.0 -0.52
LG/J m 86.7 53.2   19 12.2 0.613 5.0, 174.0 -0.66
LP/J m 19.5 31.0   20 6.93 1.59 1.0, 108.0 -1.32
MA/MyJ m 277.0 137.0   16 34.3 0.495 54.0, 496.0 1.18
MOLF/EiJ m 49.1 35.6   16 8.91 0.725 5.0, 113.0 -1.03
MRL/MpJ m 169.0 109.0   19 25.0 0.643 56.0, 566.0 0.13
MSM/MsJ m 92.1 47.8   18 11.3 0.519 41.0, 221.0 -0.61
NOD/ShiLtJ m 422.0 91.1   19 20.9 0.216 283.0, 619.0 2.58
NON/ShiLtJ m 237.0 96.6   20 21.6 0.407 71.0, 404.0 0.79
NOR/LtJ m 286.0 94.4   20 21.1 0.331 132.0, 457.0 1.27
NZB/BlNJ m 41.0 17.9   18 4.22 0.437 16.0, 79.0 -1.11
NZO/HlLtJ m 35.7 20.0   16 4.99 0.559 12.0, 79.0 -1.16
NZW/LacJ m 107.0 63.6   19 14.6 0.594 36.0, 260.0 -0.47
PERA/EiJ m 56.4 16.0   15 4.14 0.284 32.0, 100.0 -0.96
P/J m 172.0 85.4   12 24.7 0.496 62.0, 333.0 0.16
PL/J m 270.0 61.6   19 14.1 0.228 160.0, 356.0 1.11
PWD/PhJ m 68.4 62.1   15 16.0 0.908 -0.84
RIIIS/J m 292.0 71.4   15 18.4 0.244 206.0, 432.0 1.32
SEA/GnJ m 201.0 88.8   16 22.2 0.442 65.0, 355.0 0.44
SJL/J m 132.0 93.7   24 19.1 0.713 41.0, 489.0 -0.23
SKIVE/EiJ m 129.0 52.2   19 12.0 0.405 68.0, 257.0 -0.25
SM/J m 277.0 59.5   19 13.6 0.214 192.0, 397.0 1.18
SWR/J m 349.0 96.5   17 23.4 0.277 173.0, 540.0 1.88
TALLYHO/JngJ m 63.2 67.4   16 16.9 1.07 5.0, 280.0 -0.89
WSB/EiJ m 55.6 40.2   17 9.74 0.722 3.0, 134.0 -0.97
ZALENDE/EiJ m 101.0 38.9   17 9.43 0.383 43.0, 175.0 -0.53


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 1.35 18.5405 37.7441 0.0
A/J m 23.8696 17.2891 57.8073 0.0
AKR/J m 134.9 18.5405 171.2941 98.5059
BALB/cByJ m 163.7222 19.5434 202.085 125.3595
BTBR T+ Itpr3tf/J m 44.6842 19.0222 82.0238 7.3446
BUB/BnJ m 278.0 20.11 317.475 238.525
C3H/HeJ m 177.75 18.5405 214.1441 141.3559
C57BL/6J m 177.4231 11.4983 199.9938 154.8524
C57BLKS/J m 88.1 18.5405 124.4941 51.7059
C57BR/cdJ m 243.125 20.7289 283.8149 202.4351
C57L/J m 261.0 19.5434 299.3628 222.6372
C58/J m 319.875 20.7289 360.5649 279.1851
CBA/J m 59.9 18.5405 96.2941 23.5059
CE/J m 126.5 19.5434 164.8628 88.1372
CZECHII/EiJ m 97.0556 19.5434 135.4183 58.6928
DBA/2J m 134.9444 19.5434 173.3072 96.5817
DDY/JclSidSeyFrkJ m 129.5625 20.7289 170.2524 88.8726
FVB/NJ m 315.1 18.5405 351.4941 278.7059
I/LnJ m 120.7333 21.4087 162.7576 78.709
KK/HlJ m 102.2 21.4087 144.2243 60.1757
LG/J m 86.7368 19.0222 124.0764 49.3973
LP/J m 19.5 18.5405 55.8941 0.0
MA/MyJ m 276.8125 20.7289 317.5024 236.1226
MOLF/EiJ m 49.125 20.7289 89.8149 8.4351
MRL/MpJ m 169.3684 19.0222 206.708 132.0288
MSM/MsJ m 92.0556 19.5434 130.4183 53.6928
NOD/ShiLtJ m 422.2632 19.0222 459.6027 384.9236
NON/ShiLtJ m 237.1 18.5405 273.4941 200.7059
NOR/LtJ m 285.7 18.5405 322.0941 249.3059
NZB/BlNJ m 41.0 19.5434 79.3628 2.6372
NZO/HlLtJ m 35.6875 20.7289 76.3774 0.0
NZW/LacJ m 107.1579 19.0222 144.4975 69.8183
PERA/EiJ m 56.4 21.4087 98.4243 14.3757
P/J m 172.25 23.9357 219.2346 125.2654
PL/J m 270.2105 19.0222 307.5501 232.8709
PWD/PhJ m 68.4 21.4087 110.4243 26.3757
RIIIS/J m 291.9333 21.4087 333.9576 249.909
SEA/GnJ m 200.8125 20.7289 241.5024 160.1226
SJL/J m 131.5 16.9251 164.7231 98.2769
SKIVE/EiJ m 128.8947 19.0222 166.2343 91.5552
SM/J m 277.2632 19.0222 314.6027 239.9236
SWR/J m 348.7647 20.11 388.2397 309.2897
TALLYHO/JngJ m 63.25 20.7289 103.9399 22.5601
WSB/EiJ m 55.6471 20.11 95.122 16.1721
ZALENDE/EiJ m 101.4118 20.11 140.8867 61.9368




  GWAS USING LINEAR MIXED MODELS