Project measure / variable:   Tarantino1   amb_epi_diff

ID, description, units MPD:45918   amb_epi_diff   ambulatory episodes, 30 min test   [n]  difference  
cocaine study
Data set, strains Tarantino1   inbred   45 strains     sex: m     age:
Procedure open field test
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  STRAIN COMPARISON PLOT
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Tarantino1 - ambulatory episodes, 30 min test difference



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested45 strains
Mean of the strain means199   n
Median of the strain means200   n
SD of the strain means± 96.9
Coefficient of variation (CV)0.488
Min–max range of strain means-15.1   –   419   n
Mean sample size per strain18.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 44 7735080.1175 175797.2754 10.2958 < 0.0001
Residuals 793 13540203.2107 17074.6573


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 65.0 128.0   20 28.6 1.97 -37.0, 385.0 -1.38
A/J m 58.7 123.0   23 25.7 2.09 -96.0, 385.0 -1.44
AKR/J m 183.0 127.0   20 28.5 0.697 -81.0, 342.0 -0.16
BALB/cByJ m 33.8 120.0   18 28.4 3.57 -163.0, 239.0 -1.7
BTBR T+ Itpr3tf/J m 119.0 152.0   19 34.9 1.28 -87.0, 444.0 -0.82
BUB/BnJ m 200.0 188.0   17 45.6 0.939 -347.0, 405.0 0.01
C3H/HeJ m 310.0 117.0   20 26.2 0.378 60.0, 465.0 1.15
C57BL/6J m 302.0 95.8   52 13.3 0.317 75.0, 554.0 1.07
C57BLKS/J m 247.0 149.0   20 33.3 0.604 -30.0, 483.0 0.5
C57BR/cdJ m 8.56 152.0   16 38.0 17.7 -274.0, 269.0 -1.96
C57L/J m 217.0 129.0   18 30.4 0.596 14.0, 474.0 0.19
C58/J m 268.0 138.0   16 34.5 0.514 37.0, 464.0 0.72
CBA/J m 311.0 138.0   20 30.8 0.443 19.0, 525.0 1.16
CE/J m 200.0 65.2   18 15.4 0.326 77.0, 311.0 0.01
CZECHII/EiJ m 160.0 130.0   18 30.7 0.813 -116.0, 406.0 -0.4
DBA/2J m 130.0 160.0   18 37.8 1.23 -115.0, 417.0 -0.71
DDY/JclSidSeyFrkJ m 319.0 110.0   16 27.6 0.346 105.0, 505.0 1.24
FVB/NJ m 110.0 151.0   20 33.7 1.37 -150.0, 336.0 -0.91
I/LnJ m 337.0 132.0   15 34.0 0.391 158.0, 535.0 1.43
KK/HlJ m 270.0 118.0   15 30.4 0.436 74.0, 468.0 0.74
LG/J m -15.1 74.9   19 17.2 -4.98 -121.0, 153.0 -2.21
LP/J m 48.5 75.9   20 17.0 1.57 -30.0, 230.0 -1.55
MA/MyJ m 176.0 168.0   16 42.0 0.956 -127.0, 398.0 -0.23
MOLF/EiJ m 201.0 129.0   16 32.3 0.645 -37.0, 368.0 0.03
MRL/MpJ m 241.0 129.0   19 29.7 0.536 -76.0, 415.0 0.44
MSM/MsJ m 230.0 162.0   18 38.3 0.708 -107.0, 497.0 0.32
NOD/ShiLtJ m 218.0 104.0   19 23.8 0.476 -8.0, 330.0 0.2
NON/ShiLtJ m 290.0 84.5   20 18.9 0.292 124.0, 421.0 0.94
NOR/LtJ m 215.0 133.0   20 29.8 0.619 -174.0, 351.0 0.17
NZB/BlNJ m 258.0 123.0   18 29.1 0.478 1.0, 466.0 0.61
NZO/HlLtJ m 167.0 107.0   16 26.6 0.639 20.0, 359.0 -0.33
NZW/LacJ m 144.0 111.0   19 25.6 0.772 -17.0, 349.0 -0.56
PERA/EiJ m 174.0 69.7   15 18.0 0.4 75.0, 295.0 -0.25
P/J m 173.0 73.5   12 21.2 0.425 39.0, 307.0 -0.26
PL/J m 270.0 108.0   19 24.8 0.401 56.0, 421.0 0.74
PWD/PhJ m 419.0 213.0   15 55.1 0.509 178.0, 816.0 2.28
RIIIS/J m 92.5 110.0   15 28.4 1.19 -100.0, 257.0 -1.1
SEA/GnJ m 170.0 216.0   15 55.9 1.27 -183.0, 443.0 -0.3
SJL/J m 161.0 171.0   24 34.8 1.06 -77.0, 514.0 -0.39
SKIVE/EiJ m 375.0 121.0   18 28.6 0.324 164.0, 611.0 1.82
SM/J m 156.0 108.0   19 24.7 0.69 -58.0, 374.0 -0.44
SWR/J m 328.0 127.0   17 30.8 0.387 52.0, 528.0 1.34
TALLYHO/JngJ m 226.0 137.0   16 34.2 0.606 -1.0, 450.0 0.28
WSB/EiJ m 151.0 179.0   17 43.5 1.19 -108.0, 415.0 -0.49
ZALENDE/EiJ m 218.0 95.0   17 23.1 0.436 52.0, 359.0 0.2


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 65.0 29.2187 122.3552 7.6448
A/J m 58.7391 27.2466 112.2231 5.2552
AKR/J m 182.85 29.2187 240.2052 125.4948
BALB/cByJ m 33.7778 30.7992 94.2354 -26.6799
BTBR T+ Itpr3tf/J m 119.1579 29.9778 178.003 60.3127
BUB/BnJ m 200.4118 31.6921 262.6222 138.2014
C3H/HeJ m 309.75 29.2187 367.1052 252.3948
C57BL/6J m 302.0577 18.1207 337.6278 266.4875
C57BLKS/J m 246.6 29.2187 303.9552 189.2448
C57BR/cdJ m 8.5625 32.6675 72.6875 -55.5625
C57L/J m 216.6111 30.7992 277.0688 156.1535
C58/J m 268.5 32.6675 332.625 204.375
CBA/J m 311.35 29.2187 368.7052 253.9948
CE/J m 200.2778 30.7992 260.7354 139.8201
CZECHII/EiJ m 160.1667 30.7992 220.6243 99.709
DBA/2J m 130.2222 30.7992 190.6799 69.7646
DDY/JclSidSeyFrkJ m 319.0625 32.6675 383.1875 254.9375
FVB/NJ m 110.2 29.2187 167.5552 52.8448
I/LnJ m 336.8667 33.7389 403.0947 270.6386
KK/HlJ m 270.0667 33.7389 336.2947 203.8386
LG/J m -15.0526 29.9778 43.7925 -73.8978
LP/J m 48.45 29.2187 105.8052 -8.9052
MA/MyJ m 175.875 32.6675 240.0 111.75
MOLF/EiJ m 200.6875 32.6675 264.8125 136.5625
MRL/MpJ m 241.3158 29.9778 300.1609 182.4706
MSM/MsJ m 229.6111 30.7992 290.0688 169.1535
NOD/ShiLtJ m 218.0 29.9778 276.8451 159.1549
NON/ShiLtJ m 289.7 29.2187 347.0552 232.3448
NOR/LtJ m 214.9 29.2187 272.2552 157.5448
NZB/BlNJ m 258.1667 30.7992 318.6243 197.709
NZO/HlLtJ m 166.6875 32.6675 230.8125 102.5625
NZW/LacJ m 144.3684 29.9778 203.2136 85.5233
PERA/EiJ m 174.2 33.7389 240.428 107.972
P/J m 173.0 37.7212 247.0452 98.9548
PL/J m 269.5789 29.9778 328.4241 210.7338
PWD/PhJ m 419.4 33.7389 485.628 353.172
RIIIS/J m 92.4667 33.7389 158.6947 26.2386
SEA/GnJ m 170.0667 33.7389 236.2947 103.8386
SJL/J m 160.625 26.6729 212.9829 108.2671
SKIVE/EiJ m 375.1111 30.7992 435.5688 314.6535
SM/J m 156.1053 29.9778 214.9504 97.2601
SWR/J m 327.7647 31.6921 389.9751 265.5543
TALLYHO/JngJ m 225.625 32.6675 289.75 161.5
WSB/EiJ m 150.5882 31.6921 212.7986 88.3778
ZALENDE/EiJ m 218.2353 31.6921 280.4457 156.0249




  GWAS USING LINEAR MIXED MODELS