Project measure / variable:   Rusyn5   liver_SAM_SAH_hf

ID, description, units MPD:43039   liver_SAM_SAH_hf   ratio of liver SAM to SAH (SAM/SAH)   [ratio]  high-fat only  
high-fat diet and ethanol study
Data set, strains Rusyn5   inbred   14 strains     sex: m     age: 8-14wks
Procedure metabolite quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Rusyn5 - ratio of liver SAM to SAH (SAM/SAH) high-fat only



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested14 strains
Mean of the strain means2.67   ratio
Median of the strain means2.53   ratio
SD of the strain means± 0.630
Coefficient of variation (CV)0.236
Min–max range of strain means1.84   –   4.29   ratio
Mean sample size per strain3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 13 15.4392 1.1876 2.1369 0.045
Residuals 28 15.5614 0.5558


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 2.06 0.0252   3 0.0145 0.0122 2.04, 2.09 -0.97
AKR/J m 2.45 0.43   3 0.248 0.176 2.08, 2.92 -0.35
BALB/cByJ m 1.84 0.332   3 0.192 0.181 1.63, 2.22 -1.32
BALB/cJ m 3.08 0.703   3 0.406 0.229 2.27, 3.56 0.65
BTBR T+ Itpr3tf/J m 2.02 0.549   3 0.317 0.271 1.39, 2.35 -1.04
C3H/HeJ m 2.97 0.72   3 0.416 0.243 2.25, 3.69 0.47
C57BL/10J m 2.82 0.956   3 0.552 0.34 1.93, 3.83 0.23
DBA/2J m 2.42 1.03   3 0.593 0.423 1.66, 3.59 -0.4
FVB/NJ m 2.42 0.537   3 0.31 0.222 1.8, 2.74 -0.4
KK/HlJ m 2.38 0.312   3 0.18 0.131 2.03, 2.63 -0.46
MOLF/EiJ m 2.6 1.05   3 0.606 0.403 1.95, 3.81 -0.11
NZW/LacJ m 4.29 0.896   3 0.517 0.209 3.63, 5.31 2.57
PWD/PhJ m 3.38 1.29   3 0.743 0.381 2.13, 4.7 1.12
WSB/EiJ m 2.68 0.509   3 0.294 0.19 2.1, 3.04 0.01


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 2.0633 0.4304 2.945 1.1817
AKR/J m 2.4467 0.4304 3.3283 1.565
BALB/cByJ m 1.8367 0.4304 2.7183 0.955
BALB/cJ m 3.0767 0.4304 3.9583 2.195
BTBR T+ Itpr3tf/J m 2.0233 0.4304 2.905 1.1417
C3H/HeJ m 2.9667 0.4304 3.8483 2.085
C57BL/10J m 2.8167 0.4304 3.6983 1.935
DBA/2J m 2.4233 0.4304 3.305 1.5417
FVB/NJ m 2.42 0.4304 3.3017 1.5383
KK/HlJ m 2.38 0.4304 3.2617 1.4983
MOLF/EiJ m 2.6 0.4304 3.4817 1.7183
NZW/LacJ m 4.29 0.4304 5.1717 3.4083
PWD/PhJ m 3.38 0.4304 4.2617 2.4983
WSB/EiJ m 2.6833 0.4304 3.565 1.8017




  GWAS USING LINEAR MIXED MODELS