Project measure / variable:   Rusyn5   liver_SAM_hf

ID, description, units MPD:43037   liver_SAM_hf   liver S-adenosylmethionine (SAM)   [nmol/mg]  high-fat only  
high-fat diet and ethanol study
Data set, strains Rusyn5   inbred   14 strains     sex: m     age: 8-14wks
Procedure metabolite quantification
Ontology mappings

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  STRAIN COMPARISON PLOT
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Rusyn5 - liver S-adenosylmethionine (SAM) high-fat only



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested14 strains
Mean of the strain means0.628   nmol/mg
Median of the strain means0.605   nmol/mg
SD of the strain means± 0.0712
Coefficient of variation (CV)0.113
Min–max range of strain means0.533   –   0.733   nmol/mg
Mean sample size per strain3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 13 0.1981 0.0152 1.7838 0.0972
Residuals 28 0.2392 0.0085


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 0.567 0.0473   3 0.0273 0.0834 0.53, 0.62 -0.85
AKR/J m 0.663 0.0651   3 0.0376 0.0981 0.6, 0.73 0.49
BALB/cByJ m 0.553 0.0513   3 0.0296 0.0927 0.51, 0.61 -1.05
BALB/cJ m 0.577 0.0808   3 0.0467 0.14 0.49, 0.65 -0.71
BTBR T+ Itpr3tf/J m 0.61 0.0854   3 0.0493 0.14 0.52, 0.69 -0.25
C3H/HeJ m 0.567 0.0513   3 0.0296 0.0906 0.51, 0.61 -0.85
C57BL/10J m 0.72 0.105   3 0.0608 0.146 0.62, 0.83 1.3
DBA/2J m 0.57 0.142   3 0.0819 0.249 0.46, 0.73 -0.81
FVB/NJ m 0.533 0.0808   3 0.0467 0.152 0.46, 0.62 -1.33
KK/HlJ m 0.68 0.171   3 0.0987 0.251 0.52, 0.86 0.73
MOLF/EiJ m 0.733 0.0902   3 0.0521 0.123 0.64, 0.82 1.48
NZW/LacJ m 0.723 0.0961   3 0.0555 0.133 0.62, 0.81 1.34
PWD/PhJ m 0.693 0.0764   3 0.0441 0.11 0.61, 0.76 0.92
WSB/EiJ m 0.6 0.0624   3 0.0361 0.104 0.53, 0.65 -0.39


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.5667 0.0534 0.676 0.4574
AKR/J m 0.6633 0.0534 0.7726 0.554
BALB/cByJ m 0.5533 0.0534 0.6626 0.444
BALB/cJ m 0.5767 0.0534 0.686 0.4674
BTBR T+ Itpr3tf/J m 0.61 0.0534 0.7193 0.5007
C3H/HeJ m 0.5667 0.0534 0.676 0.4574
C57BL/10J m 0.72 0.0534 0.8293 0.6107
DBA/2J m 0.57 0.0534 0.6793 0.4607
FVB/NJ m 0.5333 0.0534 0.6426 0.424
KK/HlJ m 0.68 0.0534 0.7893 0.5707
MOLF/EiJ m 0.7333 0.0534 0.8426 0.624
NZW/LacJ m 0.7233 0.0534 0.8326 0.614
PWD/PhJ m 0.6933 0.0534 0.8026 0.584
WSB/EiJ m 0.6 0.0534 0.7093 0.4907




  GWAS USING LINEAR MIXED MODELS