Project measure / variable:   Rusyn5   plasma_homocysteine_hf

ID, description, units MPD:43003   plasma_homocysteine_hf   homocysteine concentration (plasma)   [nmol/mL]  high-fat only  
high-fat diet and ethanol study
Data set, strains Rusyn5   inbred   14 strains     sex: m     age: 8-14wks
Procedure metabolite quantification
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Rusyn5 - homocysteine concentration (plasma) high-fat only



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested14 strains
Mean of the strain means4.93   nmol/mL
Median of the strain means5.33   nmol/mL
SD of the strain means± 1.14
Coefficient of variation (CV)0.232
Min–max range of strain means2.89   –   6.33   nmol/mL
Mean sample size per strain3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 13 46.7187 3.5937 1.7619 0.104
Residuals 27 55.0727 2.0397


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 5.85 2.43   3 1.4 0.414 3.06, 7.43 0.8
AKR/J m 4.3 0.634   3 0.366 0.147 3.63, 4.89 -0.55
BALB/cByJ m 4.7 1.94   3 1.12 0.412 3.33, 6.92 -0.2
BALB/cJ m 5.98 0.411   3 0.237 0.0687 5.51, 6.27 0.91
BTBR T+ Itpr3tf/J m 5.52 1.52   3 0.88 0.276 4.42, 7.26 0.51
C3H/HeJ m 6.3 0.851   3 0.491 0.135 5.37, 7.04 1.19
C57BL/10J m 6.33 1.37   3 0.792 0.217 4.87, 7.59 1.22
DBA/2J m 5.57 1.49   3 0.863 0.269 3.85, 6.58 0.56
FVB/NJ m 3.26 1.05   3 0.609 0.323 2.09, 4.13 -1.46
KK/HlJ m 3.58 1.17   3 0.675 0.327 2.32, 4.63 -1.18
MOLF/EiJ m 4.06 1.24   3 0.713 0.304 2.64, 4.89 -0.76
NZW/LacJ m 5.14 0.983   3 0.568 0.191 4.48, 6.27 0.18
PWD/PhJ m 5.6 2.19   3 1.26 0.391 3.08, 7.04 0.58
WSB/EiJ m 2.89 0.891   2   0.63 0.308 2.26, 3.52 -1.79


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 5.8533 0.8246 7.5452 4.1615
AKR/J m 4.3033 0.8246 5.9952 2.6115
BALB/cByJ m 4.7033 0.8246 6.3952 3.0115
BALB/cJ m 5.98 0.8246 7.6719 4.2881
BTBR T+ Itpr3tf/J m 5.52 0.8246 7.2119 3.8281
C3H/HeJ m 6.3 0.8246 7.9919 4.6081
C57BL/10J m 6.33 0.8246 8.0219 4.6381
DBA/2J m 5.5667 0.8246 7.2585 3.8748
FVB/NJ m 3.2633 0.8246 4.9552 1.5715
KK/HlJ m 3.58 0.8246 5.2719 1.8881
MOLF/EiJ m 4.06 0.8246 5.7519 2.3681
NZW/LacJ m 5.14 0.8246 6.8319 3.4481
PWD/PhJ m 5.6 0.8246 7.2919 3.9081
WSB/EiJ m 2.89 1.0099 4.9621 0.8179




  GWAS USING LINEAR MIXED MODELS