Project measure / variable:   Donahue14   ratio_wean_born

ID, description, units MPD:42305   ratio_wean_born   ratio of pups weaned to pups born   [ratio]  
Data set, strains Donahue14   BXD   42 strains     sex: f     age: 3-60wks
Procedure colony observation
Ontology mappings

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  STRAIN COMPARISON PLOT
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Donahue14 - ratio of pups weaned to pups born



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested42 strains
Mean of the strain means0.765   ratio
Median of the strain means0.798   ratio
SD of the strain means± 0.139
Coefficient of variation (CV)0.181
Min–max range of strain means0.312   –   1.00   ratio
Mean sample size per strain6.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 38 4.5283 0.1192 2.4181 < 0.0001
Residuals 234 11.5316 0.0493


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
BXD100/RwwJ f 0.733 0.173   9 0.0577 0.236 0.5, 1.0 -0.23
BXD101/RwwJ f 0.312 0.304   8 0.108 0.974 -3.27
BXD102/RwwJ f 0.75 0.212   2   0.15 0.283 0.6, 0.9 -0.11
BXD43/RwwJ f 0.625 0.33   4 0.165 0.529 0.2, 1.0 -1.01
BXD44/RwwJ f 1.0 0.0   1   0.0 0.0 1.0, 1.0 1.69
BXD45/RwwJ f 0.525 0.457   4 0.229 0.871 -1.73
BXD48a/RwwJ f 0.943 0.113   7 0.0429 0.12 0.7, 1.0 1.28
BXD48/RwwJ f 0.733 0.187   9 0.0624 0.255 0.5, 1.0 -0.23
BXD49/RwwJ f 0.876 0.109   17 0.0265 0.125 0.6, 1.0 0.8
BXD50/RwwJ f 0.656 0.167   9 0.0556 0.254 0.5, 1.0 -0.79
BXD51/RwwJ f 0.6 0.529   3 0.306 0.882 -1.19
BXD55/RwwJ f 0.8 0.0   2   0.0 0.0 0.8, 0.8 0.25
BXD56/RwwJ f 0.8 0.0   1   0.0 0.0 0.8, 0.8 0.25
BXD60/RwwJ f 0.825 0.265   16 0.0661 0.321 0.43
BXD61/RwwJ f 0.95 0.0707   2   0.05 0.0744 0.9, 1.0 1.33
BXD62/RwwJ f 0.76 0.207   5 0.0927 0.273 0.5, 1.0 -0.04
BXD63/RwwJ f 0.54 0.365   5 0.163 0.675 -1.62
BXD64/RwwJ f 0.585 0.272   20 0.0608 0.465 -1.3
BXD65a/RwwJ f 0.756 0.174   9 0.058 0.23 0.5, 1.0 -0.07
BXD65/RwwJ f 1.0 0.0   1   0.0 0.0 1.0, 1.0 1.69
BXD67/RwwJ f 0.86 0.134   5 0.06 0.156 0.7, 1.0 0.68
BXD68/RwwJ f 0.9 0.155   6 0.0632 0.172 0.6, 1.0 0.97
BXD69/RwwJ f 0.825 0.222   4 0.111 0.269 0.5, 1.0 0.43
BXD70/RwwJ f 0.789 0.302   9 0.101 0.383 0.17
BXD71/RwwJ f 0.68 0.192   5 0.086 0.283 0.5, 1.0 -0.61
BXD73a/RwwJ f 0.863 0.151   8 0.0532 0.175 0.7, 1.0 0.7
BXD73b/RwwJ f 0.857 0.15   14 0.0402 0.176 0.5, 1.0 0.66
BXD73/RwwJ f 0.94 0.0894   5 0.04 0.0952 0.8, 1.0 1.26
BXD74/RwwJ f 0.85 0.0707   2   0.05 0.0832 0.8, 0.9 0.61
BXD75/RwwJ f 0.65 0.311   4 0.155 0.478 0.2, 0.9 -0.83
BXD77/RwwJ f 0.8 0.214   8 0.0756 0.267 0.5, 1.0 0.25
BXD79/RwwJ f 0.75 0.0707   2   0.05 0.0943 0.7, 0.8 -0.11
BXD81/RwwJ f 0.55 0.212   2   0.15 0.386 0.4, 0.7 -1.55
BXD83/RwwJ f 0.833 0.153   3 0.0882 0.183 0.7, 1.0 0.49
BXD84/RwwJ f 0.795 0.175   19 0.0401 0.22 0.4, 1.0 0.21
BXD85/RwwJ f 0.813 0.173   8 0.0611 0.213 0.5, 1.0 0.34
BXD86/RwwJ f 0.86 0.134   5 0.06 0.156 0.7, 1.0 0.68
BXD87/RwwJ f 0.733 0.231   3 0.133 0.315 0.6, 1.0 -0.23
BXD89/RwwJ f 0.8 0.1   3 0.0577 0.125 0.7, 0.9 0.25
BXD90/RwwJ f 0.67 0.32   10 0.101 0.477 -0.69
BXD98/RwwJ f 0.731 0.214   13 0.0593 0.292 0.3, 1.0 -0.25
BXD99/RwwJ f 0.825 0.15   4 0.075 0.182 0.7, 1.0 0.43


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
BXD100/RwwJ f 0.7333 0.074 0.8791 0.5875
BXD101/RwwJ f 0.3125 0.0785 0.4671 0.1579
BXD102/RwwJ f 0.75 0.157 1.0593 0.4407
BXD43/RwwJ f 0.625 0.111 0.8437 0.4063
BXD45/RwwJ f 0.525 0.111 0.7437 0.3063
BXD48a/RwwJ f 0.9429 0.0839 1.1082 0.7776
BXD48/RwwJ f 0.7333 0.074 0.8791 0.5875
BXD49/RwwJ f 0.8765 0.0538 0.9825 0.7704
BXD50/RwwJ f 0.6556 0.074 0.8013 0.5098
BXD51/RwwJ f 0.6 0.1282 0.8525 0.3475
BXD55/RwwJ f 0.8 0.157 1.1093 0.4907
BXD60/RwwJ f 0.825 0.0555 0.9343 0.7157
BXD61/RwwJ f 0.95 0.157 1.2593 0.6407
BXD62/RwwJ f 0.76 0.0993 0.9556 0.5644
BXD63/RwwJ f 0.54 0.0993 0.7356 0.3444
BXD64/RwwJ f 0.585 0.0496 0.6828 0.4872
BXD65a/RwwJ f 0.7556 0.074 0.9013 0.6098
BXD67/RwwJ f 0.86 0.0993 1.0556 0.6644
BXD68/RwwJ f 0.9 0.0906 1.0786 0.7214
BXD69/RwwJ f 0.825 0.111 1.0437 0.6063
BXD70/RwwJ f 0.7889 0.074 0.9347 0.6431
BXD71/RwwJ f 0.68 0.0993 0.8756 0.4844
BXD73a/RwwJ f 0.8625 0.0785 1.0171 0.7079
BXD73b/RwwJ f 0.8571 0.0593 0.974 0.7403
BXD73/RwwJ f 0.94 0.0993 1.1356 0.7444
BXD74/RwwJ f 0.85 0.157 1.1593 0.5407
BXD75/RwwJ f 0.65 0.111 0.8687 0.4313
BXD77/RwwJ f 0.8 0.0785 0.9546 0.6454
BXD79/RwwJ f 0.75 0.157 1.0593 0.4407
BXD81/RwwJ f 0.55 0.157 0.8593 0.2407
BXD83/RwwJ f 0.8333 0.1282 1.0858 0.5808
BXD84/RwwJ f 0.7947 0.0509 0.8951 0.6944
BXD85/RwwJ f 0.8125 0.0785 0.9671 0.6579
BXD86/RwwJ f 0.86 0.0993 1.0556 0.6644
BXD87/RwwJ f 0.7333 0.1282 0.9858 0.4808
BXD89/RwwJ f 0.8 0.1282 1.0525 0.5475
BXD90/RwwJ f 0.67 0.0702 0.8083 0.5317
BXD98/RwwJ f 0.7308 0.0616 0.8521 0.6095
BXD99/RwwJ f 0.825 0.111 1.0437 0.6063




GWAS analysis not available: SNP data is not available for enough strains (at least 4)