Phenotype measure:   Gros1   susceptibility

ID, description, units MPD:38502   susceptibility   susceptibility to C. albicans based on fungal load (0=susceptible; 1=resistant)   [designation]
Candida albicans study
Data set, strains Gros1   inbred   23 strains     sex: f     age: 8-12wks
Procedure in vitro assay
Ontology mappings

  STRAIN COMPARISON PLOT
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Gros1 - susceptibility to C. albicans based on fungal load (0=susceptible; 1=resistant)



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested23 strains
Mean of the strain means0.696   designation
Median of the strain means1.00   designation
SD of the strain means± 0.470
Coefficient of variation (CV)0.676
Min–max range of strain means0   –   1.00   designation
Mean sample size per strain9.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 22 45.0577 2.0481 2.90372498153617e+31 < 0.0001
Residuals 185 0.0 0.0


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1.0 0.0   10 0.0 0.0 1.0, 1.0 0.65
A/J f 0.0 0.0   9 0.0 0.0 -1.48
AKR/J f 1.0 0.0   13 0.0 0.0 1.0, 1.0 0.65
BALB/cByJ f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.65
BPL/1J f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.65
BTBR T+ Itpr3tf/J f 0.0 0.0   10 0.0 0.0 -1.48
BUB/BnJ f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.65
C3H/HeJ f 1.0 0.0   10 0.0 0.0 1.0, 1.0 0.65
C57BL/6J f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.65
C57BLKS/J f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.65
CAST/EiJ f 1.0 0.0   10 0.0 0.0 1.0, 1.0 0.65
CBA/J f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.65
DBA/2J f 0.0 0.0   10 0.0 0.0 -1.48
DDY/JclSidSeyFrkJ f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.65
FVB/NJ f 0.0 0.0   10 0.0 0.0 -1.48
KK/HlJ f 0.0 0.0   10 0.0 0.0 -1.48
MRL/MpJ f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.65
MSM/MsJ f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.65
NOD/ShiLtJ f 0.0 0.0   10 0.0 0.0 -1.48
NZW/LacJ f 1.0 0.0   10 0.0 0.0 1.0, 1.0 0.65
PWD/PhJ f 1.0 0.0   9 0.0 0.0 1.0, 1.0 0.65
SJL/J f 1.0 0.0   8 0.0 0.0 1.0, 1.0 0.65
SM/J f 0.0 0.0   7 0.0 0.0 -1.48


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1.0 0.0 1.0 1.0
A/J f 0.0 0.0 0.0 0.0
AKR/J f 1.0 0.0 1.0 1.0
BALB/cByJ f 1.0 0.0 1.0 1.0
BPL/1J f 1.0 0.0 1.0 1.0
BTBR T+ Itpr3tf/J f 0.0 0.0 0.0 0.0
BUB/BnJ f 1.0 0.0 1.0 1.0
C3H/HeJ f 1.0 0.0 1.0 1.0
C57BL/6J f 1.0 0.0 1.0 1.0
C57BLKS/J f 1.0 0.0 1.0 1.0
CAST/EiJ f 1.0 0.0 1.0 1.0
CBA/J f 1.0 0.0 1.0 1.0
DBA/2J f 0.0 0.0 0.0 0.0
DDY/JclSidSeyFrkJ f 1.0 0.0 1.0 1.0
FVB/NJ f 0.0 0.0 0.0 0.0
KK/HlJ f 0.0 0.0 0.0 0.0
MRL/MpJ f 1.0 0.0 1.0 1.0
MSM/MsJ f 1.0 0.0 1.0 1.0
NOD/ShiLtJ f 0.0 0.0 0.0 0.0
NZW/LacJ f 1.0 0.0 1.0 1.0
PWD/PhJ f 1.0 0.0 1.0 1.0
SJL/J f 1.0 0.0 1.0 1.0
SM/J f 0.0 0.0 0.0 0.0




  GWAS USING LINEAR MIXED MODELS