Project measure / variable:   Rusyn2   ALT

ID, description, units MPD:36111   ALT   alanine transaminase (serum ALT), naive   [IU/L]  
Data set, strains Rusyn2   inbred   16 strains     sex: m     age: 7wks
Procedure metabolic panel
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  STRAIN COMPARISON PLOT
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Rusyn2 - alanine transaminase (serum ALT), naive



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested16 strains
Mean of the strain means41.1   IU/L
Median of the strain means33.0   IU/L
SD of the strain means± 23.0
Coefficient of variation (CV)0.560
Min–max range of strain means17.9   –   103   IU/L
Mean sample size per strain3.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 14 18883.0022 1348.7859 1.3226 0.2483
Residuals 32 32633.0127 1019.7816


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 29.1 13.4   3 7.75 0.462 19.4, 44.4 -0.52
A/J m 59.3 11.2   3 6.49 0.19 46.4, 66.8 0.79
AKR/J m 17.9 12.8   3 7.38 0.716 9.7, 32.6 -1.01
B6C3F1/J m 47.0 0.0   1   0.0 0.0 47.0, 47.0 0.26
BALB/cByJ m 34.5 4.48   3 2.59 0.13 31.2, 39.6 -0.29
BTBR T+ Itpr3tf/J m 23.8 9.59   3 5.54 0.402 17.0, 34.8 -0.75
C3H/HeJ m 42.9 34.7   5 15.5 0.81 21.0, 104.0 0.08
C57BL/6J m 43.1 42.2   5 18.9 0.98 17.6, 117.0 0.09
CAST/EiJ m 31.4 9.37   3 5.41 0.298 25.1, 42.2 -0.42
DBA/2J m 22.1 19.6   3 11.3 0.886 2.9, 42.1 -0.82
FVB/NJ m 65.0 33.7   3 19.4 0.518 29.9, 97.0 1.04
KK/HlJ m 103.0 115.0   2   81.2 1.12 21.5, 184.0 2.69
MOLF/EiJ m 18.7 27.7   3 16.0 1.48 1.3, 50.7 -0.97
NOD/ShiLtJ m 27.3 8.92   3 5.15 0.327 19.7, 37.1 -0.6
NZW/LacJ m 24.3 7.5   3 4.33 0.308 16.4, 31.3 -0.73
PWD/PhJ m 67.5 35.9   2   25.3 0.532 42.1, 92.8 1.15


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 29.0667 18.4371 66.6218 0.0
A/J m 59.3333 18.4371 96.8885 21.7782
AKR/J m 17.8667 18.4371 55.4218 0.0
BALB/cByJ m 34.5 18.4371 72.0552 0.0
BTBR T+ Itpr3tf/J m 23.8333 18.4371 61.3885 0.0
C3H/HeJ m 42.88 14.2813 71.9701 13.7899
C57BL/6J m 43.12 14.2813 72.2101 14.0299
CAST/EiJ m 31.4333 18.4371 68.9885 0.0
DBA/2J m 22.1333 18.4371 59.6885 0.0
FVB/NJ m 65.0333 18.4371 102.5885 27.4782
KK/HlJ m 102.75 22.5808 148.7455 56.7545
MOLF/EiJ m 18.7333 18.4371 56.2885 0.0
NOD/ShiLtJ m 27.2667 18.4371 64.8218 0.0
NZW/LacJ m 24.3333 18.4371 61.8885 0.0
PWD/PhJ m 67.45 22.5808 113.4455 21.4545




  GWAS USING LINEAR MIXED MODELS