Project measure / variable:   Yuan3   Na_M06

ID, description, units MPD:24446   Na_M06   sodium (serum Na)   [mmol/L]  at age 6mo  
Data set, strains Yuan3   inbred   30 strains     sex: both     age: 26wks
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  STRAIN COMPARISON PLOT
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Yuan3 - sodium (serum Na) at age 6mo

WSB/EiJC3H/HeJPWD/PhJC57BR/cdJNZW/LacJC57L/JA/JNON/ShiLtJNZO/HlLtJBTBR T<+> Itpr3<tf>/JSJL/JBALB/cByJNOD.B10Sn-H2<b>/JRIIIS/JDBA/2JMRL/MpJC57BL/10JC57BLKS/JSM/JCBA/JP/JKK/HlJLP/J129S1/SvImJBUB/BnJFVB/NJPL/JC57BL/6JCAST/EiJMOLF/EiJ mmol/L 140145150155160165femalemale


  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested28 strains25 strains
Mean of the strain means154   mmol/L 157   mmol/L
Median of the strain means154   mmol/L 156   mmol/L
SD of the strain means± 3.89 ± 5.12
Coefficient of variation (CV)0.0253 0.0327
Min–max range of strain means144   –   160   mmol/L 143   –   164   mmol/L
Mean sample size per strain7.8   mice 7.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 675.4918 675.4918 53.2304 < 0.0001
strain 22 4072.2336 185.1015 14.5864 < 0.0001
sex:strain 22 2009.3016 91.3319 7.1972 < 0.0001
Residuals 313 3971.9591 12.69


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 53 (53)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ f 150.0 2.51   6 1.02 0.0167 148.0, 154.0 -1.06
129S1/SvImJ m 156.0 2.33   8 0.822 0.0149 154.0, 161.0 -0.13
A/J f 154.0 2.42   16 0.605 0.0158 149.0, 157.0 -0.04
A/J m 163.0 2.83   8 0.999 0.0174 158.0, 168.0 1.23
BALB/cByJ f 159.0 3.13   6 1.28 0.0197 156.0, 164.0 1.25
BALB/cByJ m 155.0 1.83   8 0.648 0.0118 152.0, 157.0 -0.33
BTBR T+ Itpr3tf/J f 154.0 2.45   4 1.22 0.0159 151.0, 157.0 -0.04
BTBR T+ Itpr3tf/J m 160.0 2.33   8 0.822 0.0145 157.0, 163.0 0.65
BUB/BnJ f 154.0 2.86   6 1.17 0.0186 150.0, 158.0 -0.04
BUB/BnJ m 152.0 3.83   6 1.56 0.0251 147.0, 158.0 -0.91
C3H/HeJ f 159.0 3.91   7 1.48 0.0245 152.0, 164.0 1.25
C3H/HeJ m 164.0 1.25   7 0.474 0.00766 162.0, 165.0 1.43
C57BL/10J f 154.0 1.6   8 0.565 0.0104 151.0, 156.0 -0.04
C57BL/10J m 156.0 1.46   8 0.515 0.00935 154.0, 158.0 -0.13
C57BL/6J f 150.0 3.38   8 1.19 0.0226 146.0, 154.0 -1.06
C57BL/6J m 150.0 7.33   4 3.66 0.049 139.0, 156.0 -1.3
C57BLKS/J f 154.0 2.56   8 0.905 0.0167 150.0, 157.0 -0.04
C57BLKS/J m 155.0 2.95   8 1.04 0.019 150.0, 159.0 -0.33
C57BR/cdJ m 159.0 1.15   4 0.577 0.00726 158.0, 160.0 0.45
C57L/J f 157.0 1.36   8 0.479 0.00865 155.0, 159.0 0.73
C57L/J m 160.0 5.63   8 1.99 0.0352 154.0, 168.0 0.65
CAST/EiJ f 148.0 6.08   4 3.04 0.041 143.0, 157.0 -1.58
CBA/J f 154.0 1.75   8 0.62 0.0114 152.0, 156.0 -0.04
DBA/2J f 153.0 3.92   8 1.39 0.0257 146.0, 159.0 -0.29
DBA/2J m 159.0 5.41   16 1.35 0.034 148.0, 165.0 0.45
FVB/NJ f 151.0 5.07   14 1.36 0.0336 142.0, 158.0 -0.81
FVB/NJ m 154.0 1.36   9 0.455 0.00885 152.0, 156.0 -0.52
KK/HlJ f 153.0 4.55   8 1.61 0.0298 147.0, 160.0 -0.29
LP/J f 154.0 2.62   8 0.926 0.017 150.0, 158.0 -0.04
LP/J m 152.0 3.37   8 1.19 0.0221 148.0, 159.0 -0.91
MOLF/EiJ f 144.0 2.12   2   1.5 0.0148 142.0, 145.0 -2.6
MOLF/EiJ m 143.0 3.74   5 1.67 0.0262 137.0, 146.0 -2.67
MRL/MpJ m 155.0 2.6   8 0.921 0.0168 153.0, 161.0 -0.33
NOD.B10Sn-H2b/J f 158.0 4.96   9 1.65 0.0314 150.0, 164.0 0.99
NOD.B10Sn-H2b/J m 156.0 3.18   7 1.2 0.0204 151.0, 161.0 -0.13
NON/ShiLtJ f 153.0 2.03   8 0.718 0.0133 150.0, 157.0 -0.29
NON/ShiLtJ m 163.0 3.42   7 1.29 0.021 157.0, 167.0 1.23
NZO/HlLtJ f 154.0 2.25   8 0.796 0.0146 152.0, 159.0 -0.04
NZO/HlLtJ m 161.0 6.21   6 2.54 0.0386 152.0, 168.0 0.84
NZW/LacJ f 159.0 3.87   8 1.37 0.0244 151.0, 164.0 1.25
P/J f 159.0 6.99   8 2.47 0.044 147.0, 166.0 1.25
P/J m 149.0 2.05   8 0.726 0.0138 146.0, 152.0 -1.5
PL/J f 152.0 2.25   11 0.678 0.0148 149.0, 157.0 -0.55
PL/J m 153.0 1.45   9 0.484 0.0095 151.0, 156.0 -0.72
PWD/PhJ f 160.0 3.46   8 1.22 0.0217 155.0, 165.0 1.5
PWD/PhJ m 159.0 3.85   7 1.45 0.0242 154.0, 165.0 0.45
RIIIS/J f 152.0 4.68   7 1.77 0.0307 143.0, 158.0 -0.55
RIIIS/J m 161.0 2.05   8 0.726 0.0127 158.0, 164.0 0.84
SJL/J f 157.0 1.36   8 0.479 0.00865 154.0, 159.0 0.73
SM/J f 150.0 1.83   8 0.648 0.0122 146.0, 152.0 -1.06
SM/J m 158.0 5.0   6 2.04 0.0317 151.0, 164.0 0.26
WSB/EiJ f 160.0 5.07   8 1.79 0.0318 153.0, 168.0 1.5
WSB/EiJ m 164.0 2.43   6 0.992 0.0148 162.0, 168.0 1.43


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 150.5 1.4543 153.3614 147.6386
129S1/SvImJ m 156.375 1.2595 158.8531 153.8969
A/J f 153.5625 0.8906 155.3148 151.8102
A/J m 162.625 1.2595 165.1031 160.1469
BALB/cByJ f 158.8333 1.4543 161.6948 155.9719
BALB/cByJ m 154.75 1.2595 157.2281 152.2719
BTBR T+ Itpr3tf/J f 154.0 1.7811 157.5045 150.4955
BTBR T+ Itpr3tf/J m 160.375 1.2595 162.8531 157.8969
BUB/BnJ f 153.8333 1.4543 156.6948 150.9719
BUB/BnJ m 152.3333 1.4543 155.1948 149.4719
C3H/HeJ f 159.4286 1.3464 162.0778 156.7794
C3H/HeJ m 163.7143 1.3464 166.3635 161.0651
C57BL/10J f 154.375 1.2595 156.8531 151.8969
C57BL/10J m 155.875 1.2595 158.3531 153.3969
C57BL/6J f 149.625 1.2595 152.1031 147.1469
C57BL/6J m 149.5 1.7811 153.0045 145.9955
C57BLKS/J f 153.625 1.2595 156.1031 151.1469
C57BLKS/J m 154.875 1.2595 157.3531 152.3969
C57L/J f 156.875 1.2595 159.3531 154.3969
C57L/J m 160.0 1.2595 162.4781 157.5219
DBA/2J f 152.75 1.2595 155.2281 150.2719
DBA/2J m 159.375 0.8906 161.1273 157.6227
FVB/NJ f 150.7857 0.9521 152.659 148.9125
FVB/NJ m 154.1111 1.1874 156.4475 151.7748
LP/J f 154.0 1.2595 156.4781 151.5219
LP/J m 152.25 1.2595 154.7281 149.7719
MOLF/EiJ f 143.5 2.5189 148.4562 138.5438
MOLF/EiJ m 143.0 1.5931 146.1346 139.8654
NOD.B10Sn-H2b/J f 157.8889 1.1874 160.2252 155.5525
NOD.B10Sn-H2b/J m 156.1429 1.3464 158.792 153.4937
NON/ShiLtJ f 152.875 1.2595 155.3531 150.3969
NON/ShiLtJ m 163.0 1.3464 165.6492 160.3508
NZO/HlLtJ f 154.25 1.2595 156.7281 151.7719
NZO/HlLtJ m 160.8333 1.4543 163.6948 157.9719
P/J f 159.0 1.2595 161.4781 156.5219
P/J m 149.25 1.2595 151.7281 146.7719
PL/J f 152.3636 1.0741 154.477 150.2503
PL/J m 152.8889 1.1874 155.2252 150.5525
PWD/PhJ f 160.0 1.2595 162.4781 157.5219
PWD/PhJ m 159.1429 1.3464 161.792 156.4937
RIIIS/J f 152.2857 1.3464 154.9349 149.6365
RIIIS/J m 161.25 1.2595 163.7281 158.7719
SM/J f 149.75 1.2595 152.2281 147.2719
SM/J m 157.8333 1.4543 160.6948 154.9719
WSB/EiJ f 159.5 1.2595 161.9781 157.0219
WSB/EiJ m 164.5 1.4543 167.3614 161.6386


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 153.4375 0.9619 155.3302 151.5448
A/J both 158.0938 0.7713 159.6113 156.5762
BALB/cByJ both 156.7917 0.9619 158.6843 154.899
BTBR T+ Itpr3tf/J both 157.1875 1.0907 159.3336 155.0414
BUB/BnJ both 153.0833 1.0283 155.1067 151.06
C3H/HeJ both 161.5714 0.9521 163.4447 159.6982
C57BL/10J both 155.125 0.8906 156.8773 153.3727
C57BL/6J both 149.5625 1.0907 151.7086 147.4164
C57BLKS/J both 154.25 0.8906 156.0023 152.4977
C57L/J both 158.4375 0.8906 160.1898 156.6852
DBA/2J both 156.0625 0.7713 157.58 154.545
FVB/NJ both 152.4484 0.761 153.9457 150.9511
LP/J both 153.125 0.8906 154.8773 151.3727
MOLF/EiJ both 143.25 1.4902 146.1821 140.3179
NOD.B10Sn-H2b/J both 157.0159 0.8976 158.782 155.2498
NON/ShiLtJ both 157.9375 0.9218 159.7513 156.1237
NZO/HlLtJ both 157.5417 0.9619 159.4343 155.649
P/J both 154.125 0.8906 155.8773 152.3727
PL/J both 152.6263 0.8006 154.2014 151.0511
PWD/PhJ both 159.5714 0.9218 161.3852 157.7577
RIIIS/J both 156.7679 0.9218 158.5816 154.9541
SM/J both 153.7917 0.9619 155.6843 151.899
WSB/EiJ both 162.0 0.9619 163.8927 160.1073




  GWAS USING LINEAR MIXED MODELS

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