Project measure / variable:   Yuan3   K_M18

ID, description, units MPD:24443   K_M18   potassium (serum K)   [mmol/L]  at age 18mo  
Data set, strains Yuan3   inbred   29 strains     sex: both     age: 78wks
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  STRAIN COMPARISON PLOT
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Yuan3 - potassium (serum K) at age 18mo



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested29 strains28 strains
Mean of the strain means6.11   mmol/L 6.41   mmol/L
Median of the strain means6.06   mmol/L 6.30   mmol/L
SD of the strain means± 0.540 ± 0.525
Coefficient of variation (CV)0.0883 0.0819
Min–max range of strain means5.18   –   7.51   mmol/L 5.13   –   7.28   mmol/L
Mean sample size per strain7.2   mice 6.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 7.1696 7.1696 24.1071 < 0.0001
strain 26 75.6324 2.9089 9.781 < 0.0001
sex:strain 26 14.9998 0.5769 1.9398 0.0047
Residuals 314 93.3862 0.2974


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 5.84 0.346   7 0.131 0.0592 5.28, 6.32 -0.51
129S1/SvImJ m 6.26 0.432   8 0.153 0.069 5.82, 7.12 -0.28
A/J f 6.61 0.642   8 0.227 0.0971 5.85, 7.63 0.92
A/J m 7.0 1.1   6 0.448 0.157 5.0, 8.02 1.13
BALB/cByJ f 6.65 0.382   7 0.144 0.0575 6.11, 7.33 0.99
BALB/cByJ m 7.28 0.694   6 0.283 0.0953 6.41, 8.05 1.66
BTBR T+ Itpr3tf/J f 5.32 0.307   6 0.125 0.0577 4.84, 5.78 -1.47
BTBR T+ Itpr3tf/J m 6.35 0.425   5 0.19 0.0669 5.88, 6.92 -0.11
BUB/BnJ f 5.21 0.407   5 0.182 0.0782 4.82, 5.88 -1.67
C3H/HeJ f 5.62 0.561   6 0.229 0.0997 4.58, 6.2 -0.91
C3H/HeJ m 5.95 0.416   7 0.157 0.07 5.2, 6.32 -0.87
C57BL/10J f 6.06 0.612   7 0.231 0.101 5.47, 6.81 -0.1
C57BL/10J m 6.59 0.413   7 0.156 0.0626 5.88, 7.06 0.35
C57BL/6J f 5.18 0.492   8 0.174 0.095 4.36, 5.92 -1.73
C57BL/6J m 5.77 0.386   6 0.158 0.0669 5.48, 6.52 -1.22
C57BLKS/J f 5.9 0.617   7 0.233 0.105 5.14, 6.86 -0.39
C57BLKS/J m 6.13 0.405   8 0.143 0.066 5.38, 6.8 -0.53
C57BR/cdJ f 5.71 0.527   8 0.186 0.0923 4.92, 6.48 -0.75
C57BR/cdJ m 5.78 0.271   8 0.0959 0.047 5.38, 6.24 -1.2
C57L/J f 5.74 0.294   8 0.104 0.0512 5.55, 6.41 -0.69
C57L/J m 6.03 0.322   6 0.131 0.0534 5.63, 6.47 -0.72
CBA/J f 5.64 0.44   8 0.156 0.078 5.05, 6.43 -0.88
CBA/J m 6.21 0.315   6 0.129 0.0508 5.87, 6.73 -0.38
DBA/2J f 6.44 0.63   5 0.282 0.0978 5.71, 7.25 0.61
DBA/2J m 6.9 1.26   8 0.444 0.182 5.34, 8.32 0.94
FVB/NJ f 6.75 0.499   8 0.176 0.0739 5.94, 7.34 1.18
FVB/NJ m 7.19 0.24   5 0.107 0.0334 6.92, 7.52 1.49
KK/HlJ f 5.78 0.656   10 0.208 0.114 4.68, 6.64 -0.62
KK/HlJ m 6.13 0.818   7 0.309 0.133 4.98, 7.21 -0.53
LP/J f 5.71 0.384   7 0.145 0.0673 5.37, 6.29 -0.75
LP/J m 6.79 0.77   8 0.272 0.113 5.55, 7.77 0.73
MRL/MpJ f 5.6 0.438   2   0.31 0.0783 5.29, 5.91 -0.95
MRL/MpJ m 5.13 0.467   5 0.209 0.091 4.7, 5.74 -2.44
NOD.B10Sn-H2b/J f 6.68 0.539   7 0.204 0.0807 6.25, 7.73 1.05
NOD.B10Sn-H2b/J m 7.21 0.124   4 0.0618 0.0172 7.13, 7.39 1.53
NON/ShiLtJ f 6.3 0.546   14 0.146 0.0866 5.54, 7.54 0.35
NON/ShiLtJ m 6.79 0.768   7 0.29 0.113 5.49, 8.03 0.73
NZO/HlLtJ f 6.39 0.75   9 0.25 0.117 5.6, 7.72 0.51
NZO/HlLtJ m 6.06 0.0   1   0.0 0.0 6.06, 6.06 -0.66
NZW/LacJ f 6.35 0.242   5 0.108 0.0381 5.97, 6.57 0.44
NZW/LacJ m 6.45 0.634   7 0.24 0.0982 5.83, 7.61 0.08
P/J f 7.51 0.449   5 0.201 0.0598 6.89, 8.15 2.59
P/J m 6.16 0.337   4 0.169 0.0548 5.86, 6.64 -0.47
PL/J f 6.15 0.332   7 0.125 0.054 5.52, 6.56 0.07
PL/J m 6.39 0.448   4 0.224 0.0701 5.82, 6.86 -0.03
PWD/PhJ f 6.34 0.535   7 0.202 0.0844 5.56, 7.22 0.42
PWD/PhJ m 6.86 0.36   8 0.127 0.0524 6.42, 7.4 0.86
RIIIS/J f 6.47 0.714   8 0.252 0.11 5.6, 7.62 0.66
RIIIS/J m 6.41 0.418   8 0.148 0.0651 5.56, 6.82 0.0
SJL/J f 6.06 0.537   8 0.19 0.0885 5.22, 6.81 -0.1
SJL/J m 5.83 0.249   6 0.102 0.0427 5.48, 6.2 -1.1
SM/J f 5.95 0.547   7 0.207 0.092 5.32, 6.6 -0.3
SM/J m 6.26 0.291   5 0.13 0.0465 5.9, 6.7 -0.28
SWR/J f 6.91 0.668   8 0.236 0.0967 5.93, 8.19 1.48
SWR/J m 7.26 0.392   6 0.16 0.0541 6.69, 7.79 1.62
WSB/EiJ f 6.41 0.267   8 0.0943 0.0416 6.03, 6.81 0.55
WSB/EiJ m 6.25 0.528   7 0.2 0.0845 5.45, 6.99 -0.3


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 5.84 0.2061 6.2456 5.4344
129S1/SvImJ m 6.26 0.1928 6.6394 5.8806
A/J f 6.6125 0.1928 6.9919 6.2331
A/J m 6.9967 0.2226 7.4347 6.5586
BALB/cByJ f 6.6471 0.2061 7.0527 6.2416
BALB/cByJ m 7.2833 0.2226 7.7214 6.8453
BTBR T+ Itpr3tf/J f 5.3233 0.2226 5.7614 4.8853
BTBR T+ Itpr3tf/J m 6.352 0.2439 6.8319 5.8721
C3H/HeJ f 5.6233 0.2226 6.0614 5.1853
C3H/HeJ m 5.9486 0.2061 6.3541 5.543
C57BL/10J f 6.0643 0.2061 6.4698 5.6587
C57BL/10J m 6.5914 0.2061 6.997 6.1859
C57BL/6J f 5.185 0.1928 5.5644 4.8056
C57BL/6J m 5.7667 0.2226 6.2047 5.3286
C57BLKS/J f 5.9 0.2061 6.3056 5.4944
C57BLKS/J m 6.1275 0.1928 6.5069 5.7481
C57BR/cdJ f 5.71 0.1928 6.0894 5.3306
C57BR/cdJ m 5.775 0.1928 6.1544 5.3956
C57L/J f 5.735 0.1928 6.1144 5.3556
C57L/J m 6.03 0.2226 6.4681 5.5919
CBA/J f 5.645 0.1928 6.0244 5.2656
CBA/J m 6.2067 0.2226 6.6447 5.7686
DBA/2J f 6.442 0.2439 6.9219 5.9621
DBA/2J m 6.895 0.1928 7.2744 6.5156
FVB/NJ f 6.745 0.1928 7.1244 6.3656
FVB/NJ m 7.188 0.2439 7.6679 6.7081
KK/HlJ f 5.775 0.1725 6.1143 5.4357
KK/HlJ m 6.1271 0.2061 6.5327 5.7216
LP/J f 5.71 0.2061 6.1156 5.3044
LP/J m 6.7875 0.1928 7.1669 6.4081
MRL/MpJ f 5.6 0.3856 6.3587 4.8413
MRL/MpJ m 5.132 0.2439 5.6119 4.6521
NOD.B10Sn-H2b/J f 6.6757 0.2061 7.0813 6.2702
NOD.B10Sn-H2b/J m 7.205 0.2727 7.7415 6.6685
NON/ShiLtJ f 6.3036 0.1458 6.5903 6.0168
NON/ShiLtJ m 6.7929 0.2061 7.1984 6.3873
NZW/LacJ f 6.35 0.2439 6.8299 5.8701
NZW/LacJ m 6.4529 0.2061 6.8584 6.0473
P/J f 7.51 0.2439 7.9899 7.0301
P/J m 6.16 0.2727 6.6965 5.6235
PL/J f 6.1457 0.2061 6.5513 5.7402
PL/J m 6.39 0.2727 6.9265 5.8535
PWD/PhJ f 6.34 0.2061 6.7456 5.9344
PWD/PhJ m 6.8625 0.1928 7.2419 6.4831
RIIIS/J f 6.4725 0.1928 6.8519 6.0931
RIIIS/J m 6.4125 0.1928 6.7919 6.0331
SJL/J f 6.06 0.1928 6.4394 5.6806
SJL/J m 5.825 0.2226 6.2631 5.3869
SM/J f 5.9457 0.2061 6.3513 5.5402
SM/J m 6.26 0.2439 6.7399 5.7801
SWR/J f 6.9138 0.1928 7.2931 6.5344
SWR/J m 7.2567 0.2226 7.6947 6.8186
WSB/EiJ f 6.41 0.1928 6.7894 6.0306
WSB/EiJ m 6.25 0.2061 6.6556 5.8444


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 6.05 0.1411 6.3277 5.7723
A/J both 6.8046 0.1473 7.0943 6.5148
BALB/cByJ both 6.9652 0.1517 7.2637 6.6668
BTBR T+ Itpr3tf/J both 5.8377 0.1651 6.1625 5.5128
C3H/HeJ both 5.786 0.1517 6.0844 5.4875
C57BL/10J both 6.3279 0.1458 6.6146 6.0411
C57BL/6J both 5.4758 0.1473 5.7656 5.1861
C57BLKS/J both 6.0138 0.1411 6.2914 5.7361
C57BR/cdJ both 5.7425 0.1363 6.0108 5.4742
C57L/J both 5.8825 0.1473 6.1722 5.5928
CBA/J both 5.9258 0.1473 6.2156 5.6361
DBA/2J both 6.6685 0.1554 6.9744 6.3626
FVB/NJ both 6.9665 0.1554 7.2724 6.6606
KK/HlJ both 5.9511 0.1344 6.2155 5.6867
LP/J both 6.2488 0.1411 6.5264 5.9711
MRL/MpJ both 5.366 0.2281 5.8149 4.9171
NOD.B10Sn-H2b/J both 6.9404 0.1709 7.2766 6.6041
NON/ShiLtJ both 6.5482 0.1262 6.7966 6.2999
NZW/LacJ both 6.4014 0.1597 6.7156 6.0873
P/J both 6.835 0.1829 7.1949 6.4751
PL/J both 6.2679 0.1709 6.6041 5.9316
PWD/PhJ both 6.6012 0.1411 6.8789 6.3236
RIIIS/J both 6.4425 0.1363 6.7108 6.1742
SJL/J both 5.9425 0.1473 6.2322 5.6528
SM/J both 6.1029 0.1597 6.417 5.7887
SWR/J both 7.0852 0.1473 7.375 6.7955
WSB/EiJ both 6.33 0.1411 6.6077 6.0523




  GWAS USING LINEAR MIXED MODELS