Project measure / variable:   Crabbe4   latency_dowel15_8_30

ID, description, units MPD:19105   latency_dowel15_8_30   latency to fall, 30 min post-injection   [s]  dowel width 15.8 mm  
ethanol study
Data set, strains Crabbe4   inbred   8 strains     sex: both     age: 12-16wks
Procedure dowel balance test
Ontology mappings

  STRAIN COMPARISON PLOT
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Crabbe4 - latency to fall, 30 min post-injection dowel width 15.8 mm



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means142   s 26.8   s
Median of the strain means168   s 7.67   s
SD of the strain means± 73.1 ± 39.2
Coefficient of variation (CV)0.515 1.46
Min–max range of strain means5.00   –   240   s 4.00   –   109   s
Mean sample size per strain3.6   mice 3.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 186147.946 186147.946 16.2558 0.0002
strain 7 86015.4188 12287.917 1.0731 0.3988
sex:strain 7 75572.617 10796.0881 0.9428 0.4854
Residuals 39 446597.0 11451.2051


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 83.2 145.0   4 72.3 1.74 4.0, 300.0 -0.8
129S1/SvImJ m 5.5 1.0   4 0.5 0.182 5.0, 7.0 -0.54
A/J f 110.0 128.0   4 63.8 1.15 28.0, 300.0 -0.44
A/J m 109.0 165.0   3 95.5 1.51 3.0, 300.0 2.1
BALB/cByJ f 181.0 145.0   4 72.6 0.803 5.0, 300.0 0.53
BALB/cByJ m 8.33 7.77   3 4.48 0.932 2.0, 17.0 -0.47
BTBR T+ Itpr3tf/J f 5.0 1.0   3 0.577 0.2 4.0, 6.0 -1.87
BTBR T+ Itpr3tf/J m 4.0 2.83   2   2.0 0.707 2.0, 6.0 -0.58
C3H/HeJ f 158.0 164.0   4 82.1 1.04 13.0, 300.0 0.22
C3H/HeJ m 7.0 5.1   4 2.55 0.728 2.0, 14.0 -0.5
C57BL/6J f 179.0 145.0   4 72.4 0.807 11.0, 300.0 0.51
C57BL/6J m 65.5 61.3   4 30.6 0.935 8.0, 142.0 0.99
DBA/2J f 240.0 104.0   4 52.2 0.436 84.0, 300.0 1.34
DBA/2J m 10.0 11.8   3 6.81 1.18 -0.43
FVB/NJ f 180.0 170.0   2   120.0 0.943 60.0, 300.0 0.52
FVB/NJ m 4.67 2.31   3 1.33 0.495 2.0, 6.0 -0.56


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 83.25 53.5052 191.4744 0.0
129S1/SvImJ m 5.5 53.5052 113.7244 0.0
A/J f 110.5 53.5052 218.7244 2.2756
A/J m 109.3333 61.7824 234.3001 0.0
BALB/cByJ f 180.75 53.5052 288.9744 72.5256
BALB/cByJ m 8.3333 61.7824 133.3001 0.0
BTBR T+ Itpr3tf/J f 5.0 61.7824 129.9668 0.0
BTBR T+ Itpr3tf/J m 4.0 75.6677 157.0524 0.0
C3H/HeJ f 157.75 53.5052 265.9744 49.5256
C3H/HeJ m 7.0 53.5052 115.2244 0.0
C57BL/6J f 179.25 53.5052 287.4744 71.0256
C57BL/6J m 65.5 53.5052 173.7244 0.0
DBA/2J f 239.5 53.5052 347.7244 131.2756
DBA/2J m 10.0 61.7824 134.9668 0.0
FVB/NJ f 180.0 75.6677 333.0524 26.9476
FVB/NJ m 4.6667 61.7824 129.6334 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 44.375 37.8339 120.9012 0.0
A/J both 109.9167 40.8652 192.5744 27.2589
BALB/cByJ both 94.5417 40.8652 177.1994 11.8839
BTBR T+ Itpr3tf/J both 4.5 48.8433 103.2949 0.0
C3H/HeJ both 82.375 37.8339 158.9012 5.8488
C57BL/6J both 122.375 37.8339 198.9012 45.8488
DBA/2J both 124.75 40.8652 207.4077 42.0923
FVB/NJ both 92.3333 48.8433 191.1282 0.0




  GWAS USING LINEAR MIXED MODELS