Project measure / variable:   Crabbe1   grid_dist

ID, description, units MPD:15406   grid_dist   grid habituation, distance traveled   [cm]  control  
ethanol study
Data set, strains Crabbe1   inbred   8 strains     sex: both     age: 8-16wks
Procedure grid test
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  STRAIN COMPARISON PLOT
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Crabbe1 - grid habituation, distance traveled control



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means503   cm 589   cm
Median of the strain means500   cm 608   cm
SD of the strain means± 255 ± 287
Coefficient of variation (CV)0.506 0.486
Min–max range of strain means105   –   836   cm 212   –   970   cm
Mean sample size per strain11.9   mice 11.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 416775.9742 416775.9742 6.9119 0.0093
strain 7 11614204.945 1659172.135 27.5162 < 0.0001
sex:strain 7 235890.2665 33698.6095 0.5589 0.7885
Residuals 170 10250660.7121 60298.0042


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 105.0 57.8   12 16.7 0.552 5.0, 212.0 -1.56
129S1/SvImJ m 229.0 101.0   11 30.4 0.44 145.0, 463.0 -1.26
A/J f 231.0 90.6   11 27.3 0.392 85.0, 367.0 -1.07
A/J m 212.0 79.8   10 25.2 0.377 148.0, 349.0 -1.32
BALB/cByJ f 806.0 319.0   12 92.0 0.395 357.0, 1505.0 1.19
BALB/cByJ m 970.0 334.0   12 96.4 0.344 380.0, 1610.0 1.33
BTBR T+ Itpr3tf/J f 431.0 187.0   12 54.1 0.435 120.0, 746.0 -0.28
BTBR T+ Itpr3tf/J m 612.0 344.0   10 109.0 0.562 276.0, 1268.0 0.08
C3H/HeJ f 484.0 270.0   12 78.0 0.558 169.0, 1142.0 -0.08
C3H/HeJ m 471.0 135.0   12 39.0 0.287 266.0, 691.0 -0.41
C57BL/6J f 516.0 223.0   12 64.4 0.433 197.0, 880.0 0.05
C57BL/6J m 604.0 188.0   12 54.4 0.312 344.0, 862.0 0.05
DBA/2J f 618.0 248.0   12 71.5 0.401 398.0, 1240.0 0.45
DBA/2J m 653.0 237.0   12 68.4 0.363 286.0, 1088.0 0.22
FVB/NJ f 836.0 286.0   12 82.5 0.342 247.0, 1219.0 1.31
FVB/NJ m 962.0 432.0   12 125.0 0.449 397.0, 1965.0 1.3


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 104.5833 70.8861 244.5136 0.0
129S1/SvImJ m 229.1818 74.0381 375.3342 83.0294
A/J f 230.9091 74.0381 377.0615 84.7567
A/J m 211.7 77.6518 364.9859 58.4141
BALB/cByJ f 806.0833 70.8861 946.0136 666.1531
BALB/cByJ m 969.5833 70.8861 1109.5136 829.6531
BTBR T+ Itpr3tf/J f 430.9167 70.8861 570.8469 290.9864
BTBR T+ Itpr3tf/J m 611.9 77.6518 765.1859 458.6141
C3H/HeJ f 483.5833 70.8861 623.5136 343.6531
C3H/HeJ m 470.5833 70.8861 610.5136 330.6531
C57BL/6J f 515.75 70.8861 655.6803 375.8197
C57BL/6J m 604.0833 70.8861 744.0136 464.1531
DBA/2J f 617.5 70.8861 757.4303 477.5697
DBA/2J m 652.5833 70.8861 792.5136 512.6531
FVB/NJ f 836.1667 70.8861 976.0969 696.2364
FVB/NJ m 962.4167 70.8861 1102.3469 822.4864


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 166.8826 51.2505 268.052 65.7132
A/J both 221.3045 53.6457 327.202 115.4071
BALB/cByJ both 887.8333 50.124 986.779 788.8877
BTBR T+ Itpr3tf/J both 521.4083 52.5705 625.1834 417.6333
C3H/HeJ both 477.0833 50.124 576.029 378.1377
C57BL/6J both 559.9167 50.124 658.8623 460.971
DBA/2J both 635.0417 50.124 733.9873 536.096
FVB/NJ both 899.2917 50.124 998.2373 800.346




  GWAS USING LINEAR MIXED MODELS